Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F001703955.1_202016-
08-12] 4 sequences; 36,178,456 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq3 161 1e-34
>seq3
Length=7630574
Score = 161 bits (178), Expect = 1e-34
Identities = 1071/1702 (63%), Gaps = 55/1702 (3%)
Strand=Plus/Minus
Query 117828 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 117887
|||| || |||||||||||||| || |||||||| || |||||||| || | |||
Sbjct 1352432 GCCTGTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGC 1352373
Query 117888 ATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 117947
|| || | |||| | ||| || | |||| | ||| | | || || |||
Sbjct 1352372 ATGCTGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGA 1352313
Query 117948 TCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCC 118004
|| |||||| || || || || ||||| | |||| ||| || || |||
Sbjct 1352312 TCAATGAAGGCACCACGGTCAGCAGCCATCTG---CACAACCTGTCGCTGAGAAATCTCC 1352256
Query 118005 CACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAT 118064
||||||||| |||| || ||| || || | ||||| | ||| || ||||| ||
Sbjct 1352255 CACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAA 1352196
Query 118065 CC---ACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTG 118121
|| | | || ||| || | | ||||||| | | ||||| ||||| || |
Sbjct 1352195 CCGTTATCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACA 1352139
Query 118122 AGATCCTCCACGAGATGCTTA---TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTC 118178
||||||| |||| || |||||||| ||||| || || ||| || |
Sbjct 1352138 AGATCCTT---GAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGT 1352082
Query 118179 AGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTG 118238
| ||||| |||| ||||| |||||||||||||| ||||| || | || || | ||
Sbjct 1352081 TGGTAGATGTTGGAGGTGTAAGGCTCAAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTA 1352022
Query 118239 GAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGT 118298
||| || ||||| || || | ||| || ||||| |||| ||| | | | |
Sbjct 1352021 CTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCC 1351962
Query 118299 TCCTTGAGAGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACT 118356
|| ||| | ||||| || | | | || | || | | |||||| |||||||
Sbjct 1351961 TCTCGGAGGGGTTCCCAATCCCAAAGATCAGAG--GGCTTGACATTCCACATGTCAAACT 1351904
Query 118357 GGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 118416
|||| ||||| | || || || || |||| || || || || || || ||| |
Sbjct 1351903 GGAGAATACCCTCAGAGGCAGGGGAACCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGG 1351844
Query 118417 CCAATT-CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTC 118475
| | || | || || ||||| || || || || || || || || | |||
Sbjct 1351843 CGAGTTGCACAGA-CGTGGTAAGGGCAGCATGGTAGATGGTCTCGAAGATTTGCTTGTTC 1351785
Query 118476 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 118535
| | |||||| || ||||| | | ||| || || |||| ||||||
Sbjct 1351784 AGCTCACGAGCCTCGGGAGACTCAAAGGGCATGCGGAGGGCAAGGAAGGCATCAGCGAGA 1351725
Query 118536 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACG 118595
||||| ||||| || ||||| || || || | ||| || || ||||| | ||
Sbjct 1351724 CCTTGAACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACA 1351665
Query 118596 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 118655
|| || || ||||| | | | || | ||| | ||||| | |||| ||
Sbjct 1351664 GGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTCG 1351605
Query 118656 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT---TGACATACTTAGGAAGGGCG 118712
|| ||||| | | | || | || || ||||||| ||| | || || |
Sbjct 1351604 TGCAGCTTCTTGAAGTCGTA---GCAAGCATCTTCATAGTTGATGAAAGAGGGCAGAGAC 1351548
Query 118713 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTG 118772
| || || || || || |||| | |||||| | ||| || || || || |||
Sbjct 1351547 AAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTG 1351488
Query 118773 CACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 118832
|||| ||| || || ||||| || | ||||||||| || ||| || || |
Sbjct 1351487 CACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGATTGCAGTGA 1351428
Query 118833 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 118892
|||||||| |||||| | || | || ||||| || |||| || ||||| || | |||
Sbjct 1351427 TCCTTGTAGAGCATGAAAGGGTTTCCAGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAA 1351368
Query 118893 A-CATCGGCAGC--TGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAG 118949
| | || | ||| || | | | ||| | || |||| |||||||||| |||
Sbjct 1351367 AGCTTCTG-AGCCTTGATAGACTTGCGACCCTTACCCTCTCT--CTCGTACTTTTCGTAC 1351311
Query 118950 AGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG-CAGAA 119008
|| || ||||| || ||||| | || | || || || || || |||| || |
Sbjct 1351310 AGAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGACCAGG-GCATTCGTTGGGGCACAT 1351252
Query 119009 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068
||||| ||||| || | ||| || ||||||||||| || || |||||||| || ||
Sbjct 1351251 GAGAGTCCATTCGCCGTTCCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGC 1351192
Query 119069 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 119128
| ||| || || ||| ||| | || || | || || || || | || | ||
Sbjct 1351191 CAGGAACAGGTCACGAGCGCGGACCTCCTCCTTTCCGTGGTTCTTTCGGAGATCAAGGAA 1351132
Query 119129 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG--- 119185
|| | || || |||||||| || || ||||| | |||| | || | | ||
Sbjct 1351131 CTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACC---AGGTCGCTT 1351075
Query 119186 ---ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGAT 119242
|||| |||||| || || | |||||| ||| || ||||| ||||| |||| ||
Sbjct 1351074 GTTACCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACAAT 1351015
Query 119243 ACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGG 119300
||| | ||| ||||| || || ||| || ||| | | |||| | || ||||
Sbjct 1351014 ACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCC--AGTGGCACGGATTCGGTGG 1350957
Query 119301 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 119360
|| | |||||||| || ||| ||| || || || || | |||| | ||
Sbjct 1350956 GCGTTTAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCG 1350897
Query 119361 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGC 119420
||||| ||||| || ||| |||| | | | |||||||| || | ||||||
Sbjct 1350896 TAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAGAGCTGAGGC 1350837
Query 119421 CTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACA 119478
|| ||||| |||||||| | ||| || |||| || ||| | | |||| ||||
Sbjct 1350836 TGTGGGGTACCGGCGTTGAACAAAGTGGGGCTCGCATGAGTGA--AGAACTTGCTTGACA 1350779
Query 119479 TCTTGTCGTAGGTCTCCAAGAC 119500
| || ||| |||||||||||
Sbjct 1350778 TGAGGTTGTATGTCTCCAAGAC 1350757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618435169078240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |