Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq17 118 2e-21 seq547 113 1e-19 seq385 86.0 1e-11 >seq17 Length=315547 Score = 118 bits (130), Expect = 2e-21 Identities = 175/248 (71%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 ||||| || || || ||| | ||| |||||||| || || ||| | || ||| | Sbjct 169147 ATCATCACCGATGCCGTTACCATCGAGCAGGAGTTCCTTACCGAGGCTCTCCCTTGTGGT 169088 Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 ||| | ||||||||| | | || ||| ||||||||||| ||||| || || || | Sbjct 169087 CTTCTAGGCATGAACTCCAACCTCATGAAGCAGTACATCGAGTTCGTGGCTGATCGTCTG 169028 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | ||||| || ||| | ||||| |||||||| | | |||||||| | || |||||| Sbjct 169027 CTCGTTGCTCTCGGTAATGAGAAGGTGTACAAGGCCACAAACCCCTTCGACTTCATGGAG 168968 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 ||| || ||| || ||||||||||| ||||| ||||| || ||||| || | | Sbjct 168967 AACATCTCTCTTGGTGGCAAGACCAACTTTTTCGAGAAGCGCGTTGCCGACTACCAAAAG 168908 Query 230626 CCTGGTGT 230633 | ||||| Sbjct 168907 GCCGGTGT 168900 >seq547 Length=561 Score = 113 bits (124), Expect = 1e-19 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 336 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 277 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 276 CCCACGGTGGGC 265 >seq385 Length=1167 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| | ||||||| | |||||||||||||||| || Sbjct 365 CCCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGATCC 306 Query 165771 CCACG 165775 ||||| Sbjct 305 CCACG 301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057810975211430