Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq17 100 3e-16 >seq17 Length=315547 Score = 100 bits (110), Expect = 3e-16 Identities = 362/563 (64%), Gaps = 9/563 (2%) Strand=Plus/Plus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 ||||| || || ||| || || || || || | | ||| || |||||||| || || Sbjct 169197 AGACAGGCAAAATCGGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTC 169256 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAG 16318 | || ||||| || || ||||| | |||||| || | ||||| | || ||| Sbjct 169257 AGACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAG 169316 Query 16319 AATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTA 16378 || ||||||||||||| ||||| || | | |||| || | | | || || | Sbjct 169317 AAGATACCCTCAACAGCAGCAAAGGCAACAAGACGTTGAGCAAATGAGGAGTCCTTGTCC 169376 Query 16379 CGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCC 16438 | |||||| |||| || || || | | || ||| || || || | ||| Sbjct 169377 TGGATCCATCGAATGGCCCAGTCAGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCG 169436 Query 16439 TTAAACA---ATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTG 16495 || || | || | ||||| | | | | | || || |||||||| || | | Sbjct 169437 TTGAAGAGGTATGT-TCTTTGGGCAGGCT--CCTTGATGTAGGTATCAATGAGCAGGGAG 169493 Query 16496 TACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCC 16555 || | || ||||| |||||||| || ||||| || || ||||||||||||||||| Sbjct 169494 TATGTCTCAGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCG 169553 Query 16556 GCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTT 16615 | || || || || || ||||| || | |||||||| || |||||||| || Sbjct 169554 GGGATCTGGACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATACCATCGGAG 169613 Query 16616 GCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGT---AAGAATA 16672 ||||| || || || | ||||| ||||| | | || || | || | | | Sbjct 169614 GCAGCGAAGAAAGCAAGAATGTGGGAGATGAAGAACTGCTCATCTGTAGTCAAACGGTTG 169673 Query 16673 TGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACT 16732 | ||| || | | ||| ||||| | ||| | || || | ||||| ||| ||| || Sbjct 169674 TTCCAGTCGTGGAGATCCTTGGAAAGATCAATCTCCTCGGCTGTCCAGAAGGAGGCCTCT 169733 Query 16733 GCCTTTTTATACATTTTCCAAAT 16755 ||||| || ||||||| ||| || Sbjct 169734 GCCTTCTTGTACATTTGCCAGAT 169756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511408256634520