Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq51 118 1e-21 >seq51 Length=202736 Score = 118 bits (130), Expect = 1e-21 Identities = 191/271 (70%), Gaps = 4/271 (1%) Strand=Plus/Minus Query 145996 AGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAG 146055 |||||||| || ||||| || |||||| ||||||| || |||||| |||| || ||| Sbjct 136848 AGCTGGTCTACACCCTGACCAGTGTAATCCGTCTTGGCATCAACGTACTCGGCGCCAAAG 136789 Query 146056 TGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCG 146115 || | ||| ||||| ||||||||||| || ||||| || ||| | ||| || || Sbjct 136788 TGTCGCCATTGGAAGCCGTAGACGGGACCTAGGTCGCCAACCTCACGGTGTTGAAGACCA 136729 Query 146116 GCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGG 146173 | ||||||| || || || || ||| | ||||||||||||| || |||||| | Sbjct 136728 AGGTTGTCGAGGAACTCGCGCGAGCCATTGCCATCCCAGATCTTGATACCGGCCTCGCTG 136669 Query 146174 AGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCC 146233 || ||| ||||| ||| ||| || |||||||| ||||| | | ||| | | Sbjct 136668 AG-GCT-TTTGGAAGAGGTGTTGCCCTCTATAAACCAGAGGAGCTCAGCAATGACGGCGC 136611 Query 146234 TCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 |||||| | ||| ||||| || ||||| Sbjct 136610 GAGTGAAGACACGCTTCGTGGTAAGGAGGGG 136580 Score = 86.0 bits (94), Expect = 7e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 || || | ||| |||| || ||||| | |||||| || || || || |||| || || Sbjct 137211 AGTTGAACCTTGAGGGCATCGACGTGATCGAGGTATACATGAGCATCACCCATAACATGT 137152 Query 145732 ATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAG 145791 | ||| || || | || | || ||| || | ||||| || ||||| | |||| Sbjct 137151 GTCAAGCTTCCAGGGACCAGCTCACAGACGTGCGCCATCATGTGTGTTAGCAGCGCGTAG 137092 Query 145792 CTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 ||||| ||||||||||| || || || ||||| || | || || ||||| ||||||||| Sbjct 137091 CTGGCAATGTTGAAGGGAACGCCGAGACCCATATCGCAGGATCGTTGGTAGAGCTGGCAG 137032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590069711702440