Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq17 251 7e-62 seq82 140 3e-28 seq126 138 1e-27 seq81 111 2e-19 >seq17 Length=315547 Score = 251 bits (278), Expect = 7e-62 Identities = 506/738 (69%), Gaps = 17/738 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| ||||| || |||||||| | ||||||| | || || Sbjct 169756 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCCGAGGAGATTGATCTT 169697 Query 116696 TCCAAGGA-CACGAGCGACTGGGAG---CGCTTGAACGACA-ACGAGCGCCATTTCATCA 116750 |||||||| | | | ||||||| | || |||| | ||| | |||| |||||| Sbjct 169696 TCCAAGGATCTCCA-CGACTGGAACAACCGTTTGA-CTACAGATGAGCAGTTCTTCATCT 169639 Query 116751 AGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGC 116810 ||| | || || || ||||| ||| ||| || |||||||||||||| || || |||| Sbjct 169638 CCCACATTCTTGCTTTCTTCGCTGCCTCCGATGGTATCGTCAACGAGAACCTTGTTGAGC 169579 Query 116811 GTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCA 116870 | ||| ||||| ||| | ||||||| || ||||||||||| || |||||| | Sbjct 169578 GATTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTACGGTTTCCAGATCATGA 169519 Query 116871 TGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCT 116926 |||||||| | ||||| || | || || ||||| || || ||| | | || || Sbjct 169518 TGGAGAACATCCACTCTGAGACATACTCCCTGCTCATTGATACCTACATCAAGGAGC-CT 169460 Query 116927 TCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAG 116986 | | |||| | | | || |||||| | || || || || ||| || | ||||| Sbjct 169459 GCCCA-AAGAACATAC--CTCTTCAACGCCGTTGACACTATTCCTTGCATCCGAAAGAAG 169403 Query 116987 GCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTG 117046 || || ||||| | || |||||| | || || || | || | | || || || Sbjct 169402 GCTGACTGGGCCATTCGATGGATCCAGGACAAGGACTCCTCATTTGCTCAACGTCTTGTT 169343 Query 117047 GCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTC 117106 ||||| || || || ||||| ||||||| || || ||| |||| || |||||| Sbjct 169342 GCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTC 169283 Query 117107 AAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAG 117166 ||||| || ||||||||||| || ||||| ||| |||||||||||||||| | || ||| Sbjct 169282 AAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCCCGTGATGAG 169223 Query 117167 GGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCG 117226 ||||| || ||| ||||||||| | || | || | | || | ||| | Sbjct 169222 GGTCTTCACACCGATTTTGCCTGTCTCCTCCACTCTCACCTTAAGGGACGTGCCAGCAAG 169163 Query 117227 GCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAA 117286 | || ||| ||| ||||||| || || ||||||||||| ||||| ||||| Sbjct 169162 CAGATGATCCAGGACATCATCACCGATGCCGTTACCATCGAGCAGGAGTTCCTTACCGAG 169103 Query 117287 GCGCTGCC-GGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTT 117345 || || || ||| |||| || || | || | | | ||| ||| ||||||||||| Sbjct 169102 GCTCTCCCTTGTG-GTCTTCTAGGCATGAACTCCAACCTCATGAAGCAGTACATCGAGTT 169044 Query 117346 CGTCGCCGACAGGCTGCT 117363 ||| || || | ||||| Sbjct 169043 CGTGGCTGATCGTCTGCT 169026 >seq82 Length=153091 Score = 140 bits (154), Expect = 3e-28 Identities = 151/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| ||||||||| |||| ||||| || | |||| | | Sbjct 10251 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 10310 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| |||||||| ||| ||||||| || ||| | Sbjct 10311 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAACAGCGATTG 10370 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| ||||| ||||| || || | || |||||| ||||||||||||||||||| Sbjct 10371 ATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGAACCCTCTCCGACTACAACATCCAGAAG 10430 Query 40879 GAGGCCACGCTGCATCTAGT 40898 ||| | || ||||| || || Sbjct 10431 GAGTCTACTCTGCACCTTGT 10450 >seq126 Length=117423 Score = 138 bits (152), Expect = 1e-27 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || |||||||| || || |||||| | || || || | || Sbjct 30853 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 30912 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || || | ||||| |||||||| ||| ||||||| Sbjct 30913 GACACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCA 30971 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||||| |||| || || || ||||| || || | |||||||| | ||||||||| Sbjct 30972 GCAGCGACTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAA 31031 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || || || || || Sbjct 31032 CATCCAGAAGGAGTCTACTCTCCACCTGGT 31061 >seq81 Length=153540 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| ||||| ||||||||| | || ||||| | | Sbjct 143650 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCATCT 143709 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | ||||| || || | ||||| || ||||| || | |||||| Sbjct 143710 GATACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAG 143769 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||| | || | ||| ||||| ||||| || |||| || |||||| ||||||||| Sbjct 143770 CAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGACGGTCGTACCCTCTCTGACTACAAC 143829 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 ||||| || ||| | || || || || ||| | ||| Sbjct 143830 ATCCAAAAAGAGTCGACTCTCCACCTTGTGCTTCGC 143865 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40697 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCG 40756 || |||| || || || || ||||| ||||| ||| | || ||||| | | || | Sbjct 143939 TAGTCGTCAAGACCCTTACTGGCAAGACCATTACCCTTGAGGTCGAGTCATCTGATACTA 143998 Query 40757 TGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGA 40815 | | |||| ||||| || || | ||||| || || || || | |||||||| ||| Sbjct 143999 TCGACAACG-TCAAGTCTAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAGCAGCGA 144057 Query 40816 CTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAG 40875 || |||| ||| || || ||||| || || | ||||||||| ||||||||||||||| Sbjct 144058 CTTATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAACATCCAA 144117 Query 40876 AAGGAGGCCACGCTGCATCTAGTG 40899 || ||| | || || || || ||| Sbjct 144118 AAAGAGTCGACTCTCCACCTTGTG 144141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515213010929360