Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq81 116 2e-21 seq82 96.9 2e-15 seq126 95.1 8e-15 >seq81 Length=153540 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||| ||||| | ||| ||||| || ||||||||||| || || ||| |||| Sbjct 143861 AGCACAAGGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCAGAGAGGGTACGACCGTCC 143802 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| |||||||| | ||||||||||| || | || |||||||| Sbjct 143801 TCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 143742 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | ||| | || ||||| || | |||||||| Sbjct 143741 TGGATCTTGGACTTGACATTGTCGATAGTATCAGATGACTCGACCTCAAGGGTGATGGTC 143682 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||||||||| || || || ||||| ||||| Sbjct 143681 TTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 143650 >seq82 Length=153091 Score = 96.9 bits (106), Expect = 2e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | |||| || ||||| |||||||||||||| || ||| | || Sbjct 10453 AGAACAAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCC 10394 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| || | ||||| ||||| ||| | || ||||||||| Sbjct 10393 TCGAGCTGCTTGCCAGCGAAGATCAATCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCC 10334 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | || | || ||||| || | |||||||| Sbjct 10333 TGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTC 10274 Query 34358 TTGCCGGTGAGAGTTTTCACAAA 34380 ||||| || || || ||||| || Sbjct 10273 TTGCCCGTCAGGGTCTTCACGAA 10251 >seq126 Length=117423 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||||||| | |||| || ||||| |||||||||||| ||| ||| | || Sbjct 31064 AGGACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 31005 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || || || || || ||||||||||| ||| | || ||||||||| Sbjct 31004 TCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 30945 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | |||| || || || || | ||||| || Sbjct 30944 TGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 30885 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || ||||| || || || || |||||||| Sbjct 30884 TTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 30853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323068216120160