Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq19 259 4e-64 seq81 109 5e-19 seq126 100 3e-16 >seq19 Length=300009 Score = 259 bits (286), Expect = 4e-64 Identities = 570/852 (67%), Gaps = 2/852 (0%) Strand=Plus/Minus Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086 || ||||||||||| || || ||||| || || |||||| | || || || || Sbjct 119418 GACGCAAGATTGCAAACAGCGACCTCATCAGGGGCACAGTACTCAATGATCTCAGTGCAC 119359 Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCC 23146 || ||| | || || || | || | |||||||| || || ||||| |||| Sbjct 119358 AGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCC 119299 Query 23147 TTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATA 23206 |||||||||||| | || | || ||||| ||| | ||||| || || ||| | Sbjct 119298 TTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCAAAGC 119239 Query 23207 GTCTGAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGC 23265 ||||||| | | | | | || ||| || ||| ||||||||| | ||||| || Sbjct 119238 TTCTGAGCCTTGATA-GACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCGTACAGAGC 119180 Query 23266 GTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACT 23325 ||||| ||| |||||||||||||||| || || || | | | || ||||| ||| | Sbjct 119179 CTCAAACTCGTCACCGTAACAGTCGGCGAGACCAGGGCACTCGTTGGGGCACATAAGAGT 119120 Query 23326 CCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAA 23385 ||| || || || || || ||||||||||||| || ||||| ||||| ||| Sbjct 119119 CCATTCGCCGTTCTTCTCGACACGCTTCATAAAAAGATCAGGGATCCAGAGAGCCAGGAA 119060 Query 23386 CAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAA 23445 ||| || || || || |||||||| || ||| ||||||| | ||| | || || || Sbjct 119059 CAGGTCACGAGCTCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCAAA 119000 Query 23446 CACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCC 23505 ||||| || ||||| ||||| ||||| | || || || || |||| ||| ||||| || Sbjct 118999 GACGTCGGCGTGCCAGGGCTCAAGGTAGATAGCGAATGCACCAGGTCGCTTGTTGCCACC 118940 Query 23506 CTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 ||| ||||| ||||| || ||||||||| | || | ||||| || || | |||||||| Sbjct 118939 CTGGTCGACATAACGAGCAGTGTTGTTGAATACACGCAGCATGGGAACCACGCCGTTGGA 118880 Query 23566 CGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACC 23625 | ||| || || | || || | || || | |||||||| || || Sbjct 118879 AGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATTCGGTGAACGTTTAAGCC 118820 Query 23626 TATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTC 23685 || || || || || || ||||| || || || || ||||||||||| || || Sbjct 118819 AATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTGTCGTAGATACCGTC 118760 Query 23686 GATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGC 23745 ||||||||||| || | |||| | ||| || || |||| || | | || ||| | Sbjct 118759 AATGCTGTCCTCCTTCATATCGACAAGGAAGCATGAGGACAGCTGAGGCTGAGGGGTACC 118700 Query 23746 GGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGT 23805 ||| ||| ||||| ||| || || || ||| | | ||||| || ||||| || Sbjct 118699 GGCGTTGAAAAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTGGACATGAGGTTGTATGT 118640 Query 23806 GTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTA 23865 || | | | || || || || || || || | || || ||||| ||||||| Sbjct 118639 CTCCAAGACACGCTCGATATCATCACCCCAGATGCCAACAGCAACACGCATAATCATGTG 118580 Query 23866 TTGAGGTCTCTC 23877 ||||| | ||| Sbjct 118579 CTGAGGACGCTC 118568 >seq81 Length=153540 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||| || || ||||| || |||||| | || || || | || Sbjct 143649 CATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCATC 143708 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | |||| | ||||| | || ||||||||||||| | || || ||||| Sbjct 143709 TGATACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCA 143768 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| | || ||||| ||||| ||| | || ||| | || | || || || Sbjct 143769 GCAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGACGGTCGTACCCTCTCTGACTACAA 143828 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| |||||||| |||||||| || || || ||| | || | || |||| Sbjct 143829 CATCCAAAAAGAGTCGACTCTCCACCTTGTGCTTCGCCTTCGTGGTGGTA 143878 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| || || ||||| || || ||| | || || || | || || | | ||| Sbjct 143942 TCGTCAAGACCCTTACTGGCAAGACCATTACCCTTGAGGTCGAGTCATCTGATACTATCG 144001 Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322 | | ||||| | || |||||||||||| | || || ||||||||||| || | Sbjct 144002 ACAACGTCAAGTCTAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAGCAGCGACTTA 144061 Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382 | |||||||| || ||| | || || || | ||| || ||||| ||||||| Sbjct 144062 TCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAACATCCAAAAAG 144121 Query 31383 AATCGACTCTTCATCTGGTACTT 31405 | |||||||| || || || ||| Sbjct 144122 AGTCGACTCTCCACCTTGTGCTT 144144 >seq126 Length=117423 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| ||||| || || || || ||||||||| | || || || | || Sbjct 30852 CATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTC 30911 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | ||||| | || ||||||||| ||| | || || ||||| Sbjct 30912 CGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCA 30971 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || || ||||| || ||| | || || || ||||||| || || Sbjct 30972 GCAGCGACTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAA 31031 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || ||||| || ||||| || Sbjct 31032 CATCCAGAAGGAGTCTACTCTCCACCTGGTCCT 31064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445761045231120