Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq17 129 1e-24 seq19 111 3e-19 >seq17 Length=315547 Score = 129 bits (142), Expect = 1e-24 Identities = 297/446 (67%), Gaps = 15/446 (3%) Strand=Plus/Minus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 |||||||||||||||| ||||| || |||||||| || ||||| || || ||||| |||| Sbjct 169347 TTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCT 169288 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || ||||||| | || | |||||||||| |||| |||||| ||| |||| || | | Sbjct 169287 GGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCCCGTG 169228 Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCT----GTTGA--AAAAGGGTTTTGTTG 102089 | || |||||||| ||| ||||| || | || | | ||||| || Sbjct 169227 ATGAGGGTCTTCACACCGATTTTGCCTGTCTCCTCCACTCTCACCTTAAGGGACGTG--- 169171 Query 102090 ATACCCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAG 102149 ||| |||| | | ||| | || || |||| || ||||| || || || | Sbjct 169170 -----CCAGCAAG-CAGATGATCCAGGACATCATCACCGATGCCGTTACCATCGAGCAGG 169117 Query 102150 AATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCC 102209 | || || || | | || ||| | | | || ||||||| ||| | |||| | Sbjct 169116 AGTTCCTTACCGAGGCTCTCCCTTGTGGTCTTCTAGGCATGAACTCCAACCTCATGAAGC 169057 Query 102210 AGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATA 102269 ||||||| || || ||||| ||| || | |||| | || || ||| || | Sbjct 169056 AGTACATCGAGTTCGTGGCTGATCGTCTGCTCGTTGCTCTCGGTAATGAGAAGGTGTACA 168997 Query 102270 ATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTT 102329 | | || ||||||||| |||||||| || || || || | ||||||||||||| Sbjct 168996 AGGCCACAAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGTGGCAAGACCAACTTTT 168937 Query 102330 TTGAAAAGAGAGTCGCCGAGTATCAA 102355 | || ||| | || ||||| || ||| Sbjct 168936 TCGAGAAGCGCGTTGCCGACTACCAA 168911 >seq19 Length=300009 Score = 111 bits (122), Expect = 3e-19 Identities = 189/269 (70%), Gaps = 4/269 (1%) Strand=Plus/Minus Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833 |||| || | ||| | || ||||| ||||||| || || || ||| || || Sbjct 118833 TGAACGTTTAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTG 118774 Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893 || || ||||| |||||||| || || | | | | ||||||||| ||||| || || Sbjct 118773 TCGTAGATACCGTCAATGCTGTCCTCCTTCATATCGACAAGGAAGCATGAGGACAGCTGA 118714 Query 94894 GGTGTGACTGTT-CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGA 94952 || ||| | | || || || ||||||||||||||||| || || | | || || Sbjct 118713 GGC-TGAGGGGTACCGGCGTTGAAAAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTGGA 118655 Query 94953 CATGAGATCATATGTTTCAATGACAGATTTGATGTC-TGATCCGTGAATGCCGACAGCCA 95011 |||||| | ||||| || | |||| | ||| || | | || || |||| ||||| | Sbjct 118654 CATGAGGTTGTATGTCTCCAAGACACGCTCGATATCATCACCCCAGA-TGCCAACAGCAA 118596 Query 95012 CACGCATAATCATGTCCTGAGGGCGCTCA 95040 ||||||||||||||| |||||| |||||| Sbjct 118595 CACGCATAATCATGTGCTGAGGACGCTCA 118567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989571815437755