Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq17 132 6e-26 seq19 107 3e-18 >seq17 Length=315547 Score = 132 bits (146), Expect = 6e-26 Identities = 367/559 (66%), Gaps = 8/559 (1%) Strand=Plus/Plus Query 36157 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 36216 ||| || |||||| ||| |||||||| || | || | |||||||| || || || Sbjct 169199 ACAGGCAAAATCGGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTCAG 169258 Query 36217 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 36276 || ||||| ||||||||||| || ||||| || ||||| ||||| | || ||||| Sbjct 169259 ACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAA 169318 Query 36277 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATG 36333 || || || || || |||||||||| ||| | | || | || | |||| || Sbjct 169319 GATACCCTCAACAGCAGCAAAGGCAACAAGACGTTGAGCAAATGAGGAGTCCTTGTCCTG 169378 Query 36334 TATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCAT 36392 ||||| | || ||||| || ||||||||| | ||||| || || || | || | Sbjct 169379 GATCCATCGAATG-GCCCAGTCAGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGT 169437 Query 36393 TAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACA 36452 | ||||| || || ||| | || || | || |||||||| | || || Sbjct 169438 TGAAGAGGTATGTTCTTTGGGCAGGCTCCTTGATGTAGGTATCAATGAGCAGGGAGTATG 169497 Query 36453 TTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAA 36512 | || || || ||||| || || || || || |||||||| |||| |||||||| | Sbjct 169498 TCTCAGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGA 169557 Query 36513 TCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 36572 |||| || || | ||||| || | | || || || || || || || ||| | Sbjct 169558 TCTGGACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATACCATCGGAGGCAG 169617 Query 36573 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTA---GTTTATTCC 36629 | || || || | | || || || | | || | || || | | || |||| Sbjct 169618 CGAAGAAAGCAAGAATGTGGGAGATGAAGAACTGCTCATCTGTAGTCAAACGGTTGTTCC 169677 Query 36630 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 36689 | || | || ||| || || | ||| | || || ||||||| || || |||||||||| Sbjct 169678 AGTCGTGGAGATCCTTGGAAAGATCAATCTCCTCGGCTGTCCAGAAGGAGGCCTCTGCCT 169737 Query 36690 TTTTATACATATTCCAGAT 36708 | || ||||| | |||||| Sbjct 169738 TCTTGTACATTTGCCAGAT 169756 >seq19 Length=300009 Score = 107 bits (118), Expect = 3e-18 Identities = 564/894 (63%), Gaps = 20/894 (2%) Strand=Plus/Minus Query 65742 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 65801 || || ||||| ||||| || ||||||| || | || | || ||||||||||| Sbjct 119418 GACGCAAGATTGCAAACAGCGACCTCATCAGGGGCACAGTACTCAATGATCTCAGTGCAC 119359 Query 65802 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 65861 || || | |||||| || | || | ||| || ||||| ||| || |||| Sbjct 119358 AGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCC 119299 Query 65862 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-C 65920 || || || ||||| || | || || || |||| | || | ||| || | ||| | | Sbjct 119298 TTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCAAAGC 119239 Query 65921 GACTCGAGCCTTTATTATAGATTTGTATCTCTT---TTCTCTTTCGTA--TAGTGTATAC 65975 || |||||| | ||||| ||| | ||| ||||| ||||| | ||| | Sbjct 119238 TTCT-GAGCCT---TGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCGTACAG 119183 Query 65976 AATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATC 66035 | | || |||||||| || || | | | | ||||| || || | || ||||| Sbjct 119182 AGCC--TCAAACTCGTCACCGTAACAGTCGGCGAGACCAGGGCACTCGTTGGGGCACATA 119125 Query 66036 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 66095 | | ||| || |||| | || || || |||||||| |||||||| ||||| ||||| Sbjct 119124 AGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATAAAAAGATCAGGGATCCAGAGAGCC 119065 Query 66096 ATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 66155 | || | || | | || ||||| || || |||||| ||||| |||||| Sbjct 119064 AGGAACAGGTCACGAGCTCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAAC 119005 Query 66156 GCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTT 66215 | | | || ||||| || || | ||| || || | | ||||| || ||||| Sbjct 119004 TCAAAGACGTCGGCGTGCCAGGGCTCAAGGTAGATAGCGAATGCACCAGGTCGCTTGTTG 118945 Query 66216 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 66275 || ||||| || | || | ||| ||||| || | || | || ||| |||| | || Sbjct 118944 CCACCCTGGTCGACATAACGAGCAGTGTTGTTGAATACACGCAGCATGGGAACCACGCCG 118885 Query 66276 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGAT 66335 ||||| ||||| ||||| |||| || || ||| | ||||| || || | Sbjct 118884 TTGGAAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATTCGGTGAACGTTT 118825 Query 66336 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 66395 | || || || || ||||| || || || | || || || | || || ||||| Sbjct 118824 AAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTGTCGTAGATA 118765 Query 66396 CCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA 66455 || || || || || ||| |||| | | || || || |||| || | || Sbjct 118764 CCGTCAATGCTGTCCTCCTTCATATCGACAAGGAAGCATGAGGACAGCTGAGGCTGAGGG 118705 Query 66456 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 66515 || || || || || | || || ||||| || || || | || || | || ||| Sbjct 118704 GTACCGGCGTTGAAAAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTGGACATGAGGTTG 118645 Query 66516 TACGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCAT 66571 || ||||| | | || ||||| || |||| || || || |||||||| Sbjct 118644 TATGTCTCCAAGACACGCTCGATATCATCACCCCAGATG----CCAACAGCAACACGCAT 118589 Query 66572 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGA 66625 | |||||||||||| | ||| | || ||| | || ||||| || ||||| Sbjct 118588 AATCATGTGCTGAGGACGCTCAGCAATTTTGCCATCAATATTCAATAAATAGGA 118535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658164893699240