Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq17 145 1e-29 >seq17 Length=315547 Score = 145 bits (160), Expect = 1e-29 Identities = 370/559 (66%), Gaps = 8/559 (1%) Strand=Plus/Plus Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018 ||| || |||||| ||| |||||||| || | || || |||||||| || || || Sbjct 169199 ACAGGCAAAATCGGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTCAG 169258 Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078 || ||||| ||||||||||| || ||||| || ||||| ||||| | || ||||| Sbjct 169259 ACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAA 169318 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATG 50135 ||| || || || || |||||||||||||| | | || | || | |||| || Sbjct 169319 GATACCCTCAACAGCAGCAAAGGCAACAAGACGTTGAGCAAATGAGGAGTCCTTGTCCTG 169378 Query 50136 TATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 50194 ||||| | || ||||| || ||||||||| | ||||| || || || | ||| | Sbjct 169379 GATCCATCGAATG-GCCCAGTCAGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGT 169437 Query 50195 TAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACA 50254 | ||||| || || ||| | || || | || ||||| || | || || Sbjct 169438 TGAAGAGGTATGTTCTTTGGGCAGGCTCCTTGATGTAGGTATCAATGAGCAGGGAGTATG 169497 Query 50255 TTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAA 50314 | || || || ||||| || || ||||| || |||||||| |||| |||||||| | Sbjct 169498 TCTCAGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGA 169557 Query 50315 TCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 50374 |||| || || | ||||| ||| | | || || || || || || || ||| | Sbjct 169558 TCTGGACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATACCATCGGAGGCAG 169617 Query 50375 CAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATTCC 50431 | || || || | | || || || | || | | || | | || |||| Sbjct 169618 CGAAGAAAGCAAGAATGTGGGAGATGAAGAACTGCTCATCTGTAGTCAAACGGTTGTTCC 169677 Query 50432 AATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 50491 | || | || ||| || || | ||| | || || ||||||| || || |||||||||| Sbjct 169678 AGTCGTGGAGATCCTTGGAAAGATCAATCTCCTCGGCTGTCCAGAAGGAGGCCTCTGCCT 169737 Query 50492 TTTTATACATATTCCAGAT 50510 | || ||||| | |||||| Sbjct 169738 TCTTGTACATTTGCCAGAT 169756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718260171796040