Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq17 132 6e-26 >seq17 Length=315547 Score = 132 bits (146), Expect = 6e-26 Identities = 375/571 (66%), Gaps = 10/571 (2%) Strand=Plus/Plus Query 42064 ACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAG 42123 ||| || |||||| ||| ||||||||||| | || | |||||||| || || || Sbjct 169199 ACAGGCAAAATCGGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTCAG 169258 Query 42124 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAA 42183 || ||||| ||||||||||| || ||||| || || || ||||| | || ||||| Sbjct 169259 ACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAA 169318 Query 42184 GATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATG 42240 ||| || || || || |||||||||| ||| | | || | || | |||| || Sbjct 169319 GATACCCTCAACAGCAGCAAAGGCAACAAGACGTTGAGCAAATGAGGAGTCCTTGTCCTG 169378 Query 42241 TATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 42299 ||||| | || ||||| || ||||||||| | ||||| || || || | ||| | Sbjct 169379 GATCCATCGAATG-GCCCAGTCAGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGT 169437 Query 42300 TAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACA 42359 | ||||| || || ||| | || || | || ||||| || | || || Sbjct 169438 TGAAGAGGTATGTTCTTTGGGCAGGCTCCTTGATGTAGGTATCAATGAGCAGGGAGTATG 169497 Query 42360 TTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAA 42419 | || || || ||||| || || ||||| || |||||||| |||| ||||||| | Sbjct 169498 TCTCAGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGA 169557 Query 42420 CCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTG 42479 ||| || || | ||||| ||| | | || ||||| || || || || ||| | Sbjct 169558 TCTGGACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATACCATCGGAGGCAG 169617 Query 42480 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA---TTTATTCC 42536 | || || || | | || || || | | || || | || || || |||| Sbjct 169618 CGAAGAAAGCAAGAATGTGGGAGATGAAGAACTGCTCATCTGTAGTCAAACGGTTGTTCC 169677 Query 42537 AATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCT 42596 | || | || ||| || || | ||| | || || | ||||| || || || ||||||| Sbjct 169678 AGTCGTGGAGATCCTTGGAAAGATCAATCTCCTCGGCTGTCCAGAAGGAGGCCTCTGCCT 169737 Query 42597 TTTTATACATATTCCAGA--TATCATGATAT 42625 | || ||||| | ||||| ||||| || || Sbjct 169738 TCTTGTACATTTGCCAGATCTATCAGGAAAT 169768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671131137940360