Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq17 289 4e-73 seq19 140 5e-28 >seq17 Length=315547 Score = 289 bits (320), Expect = 4e-73 Identities = 580/849 (68%), Gaps = 33/849 (4%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| |||||||||| ||||| | ||| ||| | ||||| Sbjct 169756 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCCGAGGAGATTGATCTT 169697 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || |||| ||| | | ||||||||| | ||||| || || || Sbjct 169696 TCCAAGGATCTCCACGACTGGAACAACCGTTTGACTACAGATGAGCAGTTCTTCATCTCC 169637 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-TGTTGACACG 125197 |||||| | || ||||| || | ||||||||| ||||||||||| || | |||||| || Sbjct 169636 CACATTCTTGCTTTCTTCGCTGCCTCCGATGGTATCGTCAACGAGAACCTTGTTGA-GCG 169578 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256 |||| ||| | || || |||| ||| ||||| ||||| ||||| ||||||| Sbjct 169577 ATTCAGCGGCGAGGTCCAGATCCCCGAGG-CTCGATGCTTCTACGGTTTCCAGATCATGA 169519 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-G 125315 | |||||| | ||||| || | ||||| || ||||| | ||||| || || | Sbjct 169518 TGGAGAACATCCACTCTGAGACATACTCCCTGCTCATTGATACCTACATCAAGGAGCCTG 169459 Query 125316 CAACGTAAACACAT-GCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGC 125374 | | || |||| ||||| ||||| | ||||| | || | || || || ||||| Sbjct 169458 C--CCAAAGAACATACCTCTTCAACGCCGTTGACACTATTCCTTGCATCCGAAAGAAGGC 169401 Query 125375 TCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGC 125434 | | |||| ||||| |||||| | ||| | | || || | || | | || || || Sbjct 169400 TGACTGGGCCATTCGATGGATCCAGGACAAGGACTCCTCATTTGCTCAACGTCTTGTTGC 169341 Query 125435 ATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAA 125494 || || || || ||||| |||||||| ||| ||||| ||||||| |||||||| Sbjct 169340 CTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCAA 169281 Query 125495 GAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGG 125554 |||||| || |||||||| || ||||| | |||||| | || || || || ||||| Sbjct 169280 GAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCCCGTGATGAGGG 169221 Query 125555 CCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATC 125614 || ||| || |||||| ||| || | ||| || | | || | | | Sbjct 169220 TCTTCACACCGATTTTGCCTGTCTCCT------CCACTCTCACCTT---AAGGGACGTGC 169170 Query 125615 CAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCT 125674 |||| | | | | || |||| | ||||||||||| | || || || ||||| || Sbjct 169169 CAGCAAGCAGATGATCCAGGACATCATCACCGATGCCGTTACCATCGAGCAGGAGTTCCT 169110 Query 125675 AACCGA----ATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGT 125730 ||||| ||||| |||| | | |||||||||| ||| || ||| ||| Sbjct 169109 TACCGAGGCTCTCCCTTGTGGTC----TTCTAGGCATGAACTCCAACCTCATGAAGCAGT 169054 Query 125731 ACATAGAGTTTGTGGCAGATCGTCTAC----TGTACGAGTTGATTGGCCGCAAGATTTAC 125786 |||| ||||| ||||| |||||||| | || | | | || | ||| | ||| Sbjct 169053 ACATCGAGTTCGTGGCTGATCGTCTGCTCGTTGCTCTCGGTAATGAG----AAGGTGTAC 168998 Query 125787 AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTT 125846 || |||| || ||||| || |||||| | ||| || || | || |||||||||||| Sbjct 168997 AAGGCCACAAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGTGGCAAGACCAACTTT 168938 Query 125847 TTCGAGAAG 125855 ||||||||| Sbjct 168937 TTCGAGAAG 168929 >seq19 Length=300009 Score = 140 bits (154), Expect = 5e-28 Identities = 324/486 (67%), Gaps = 8/486 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || || || || | || ||||| | || || |||||||| ||| Sbjct 118937 CAGGGTGGCAACAAGCGACCTGGTGCATTCGCTATCTACCTTGAGCCCTGGCACGCCGAC 118996 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || ||||| || | || | || || ||| || || |||| ||||| | ||| Sbjct 118997 GTCTTTGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGAGCTCGTGAC 119056 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 |||| || |||||| | || ||| | || |||||||| ||| | | ||| | Sbjct 119057 CTGTTCCTGGCTCTCTGGATCCCTGATCTTTTTATGAAGCGTGTCGAGAAGAACGGCGAA 119116 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 |||| || ||||||||| || || || ||||| |||| || | || || |||||| Sbjct 119117 TGGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTCGCCGACTGTTACGGTGACGAGTTT 119176 Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCACG- 97174 ||||| |||| | |||||| |||||| || | | | |||| || | | Sbjct 119177 GAGGCTCTGTACGAGAAGTACGAGAGAGAGGG----TAAGGGTCGCAAGTCTATCAAGGC 119232 Query 97175 --AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCT 97231 |||| || ||| | ||||| | ||| ||| |||||| |||| || | ||| || Sbjct 119233 TCAGAAGCTTTGGTACGCCATTCTCGAGGCCCAGACAGAGACCGGAAACCCCTTCATGCT 119292 Query 97232 CTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTC 97291 |||||||||| | || ||||| ||||||||| || | || |||||| |||| Sbjct 119293 CTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGTACCATCCGAAGCTC 119352 Query 97292 CAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCT 97351 ||| |||||||| || || | |||||| | || || ||| || |||||| ||| Sbjct 119353 CAACCTGTGCACTGAGATCATTGAGTACTGTGCCCCTGATGAGGTCGCTGTTTGCAATCT 119412 Query 97352 GGCATC 97357 || || Sbjct 119413 TGCGTC 119418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741050298026360