Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq51 84.2 1e-11 >seq51 Length=202736 Score = 84.2 bits (92), Expect = 1e-11 Identities = 199/293 (68%), Gaps = 12/293 (4%) Strand=Plus/Minus Query 25307 ATGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCAC 25366 ||| ||||| || |||| | | |||||||||||| || | | || | ||| ||||| Sbjct 137320 ATGGGGGTCATATCCCTTGACTGTGAAATCCTCTGCTTTCCATCCATCAATGCT-TCCAC 137262 Query 25367 CCTCCTGTT------TATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGT 25420 ||| | || | ||| | | |||||| || ||||| | ||| || ||| Sbjct 137261 CCTTTTCTTGGGCAATTTCC-AACTCGGGGAAA-TTTCGCGGCTCGCGCTCAAGTTGAAC 137204 Query 25421 CTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTG-GACAAACT 25479 ||| || | || |||||||| ||||| || ||||| || |||| | || | ||| || Sbjct 137203 CTTGAGGGCATCGACGTGATCGAGGTATACATGAGCATCACCCATAACATGTGTCAAGCT 137144 Query 25480 CTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGA 25539 ||| || | ||| | |||| |||||||||| || || || ||||||||| | Sbjct 137143 -TCCAGGGACCAGCTCACAGACGTGCGCCATCATGTGTGTTAGCAGCGCGTAGCTGGCAA 137085 Query 25540 TGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACA 25592 |||| ||||| || |||| ||||| | | | || | ||||||||||| || Sbjct 137084 TGTTGAAGGGAACGCCGAGACCCATAT-CGCAGGATCGTTGGTAGAGCTGGCA 137033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340133616244653