Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq81 96.9 3e-15 >seq81 Length=153540 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||| | ||| | ||| || || ||||| | ||| || ||| | ||| | |||||| Sbjct 144141 CACAAGGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTC 144082 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || | ||||| | || ||||| || |||||||||||||| ||||| | Sbjct 144081 AAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCAGGAGGAATACCTTCCTTGTCCTG 144022 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || | ||||||| | ||| ||| |||| ||||| |||| || ||||| || Sbjct 144021 GATCTTAGACTTGACGTTGTCGATAGTATCAGATGACTCGACCTCAAGGGTAATGGTCTT 143962 Query 94978 TCCAGTAAGAGTTTTCAC 94995 |||||||| || || || Sbjct 143961 GCCAGTAAGGGTCTTGAC 143944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448285814901960