Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq3 107 3e-19 seq1 98.7 2e-16 >seq3 Length=622283 Score = 107 bits (118), Expect = 3e-19 Identities = 86/101 (85%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||||| | ||||| |||||||| || ||||| ||||| ||||| Sbjct 359656 GCCAAGCGTCACCGAAAGATCT-TGCGAGACAACATCCAGGGTATCACAAAGCCCGCTAT 359598 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| |||||||||||||| ||||||||| |||||| Sbjct 359597 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 359557 Score = 84.2 bits (92), Expect = 3e-12 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| |||| ||| |||||| ||||| || ||||||| ||| | Sbjct 359500 TGATCTACGAGGAGACCCGTGGTGTCCTGAAGACTTTCCTTGAGGGTGTTATCCGTGACG 359441 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 || || ||| ||||||||||| || || ||||| ||||| || | || | ||||| | Sbjct 359440 CTGTCACCTACACCGAGCACGCCAAGCGAAAGACCGTCACATCTCTCGACGTTGTCTACG 359381 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | |||| || || || |||| | || ||||| || ||||| Sbjct 359380 CCCTGAAGCGACAGGGACGTACCCTCTACGGTTTCGGTGGTTAA 359337 >seq1 Length=1044100 Score = 98.7 bits (108), Expect = 2e-16 Identities = 84/101 (83%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||| | | ||||| ||||| || || ||||| ||||| ||||| Sbjct 974694 GCCAAGCGTCACCGAAAGATTT-TGCGAGACAACATTCAGGGTATCACAAAGCCCGCTAT 974752 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| |||||||||||||| ||||||||| |||||| Sbjct 974753 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 974793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074321350973