Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq17 150 2e-31 seq19 123 3e-23 >seq17 Length=315547 Score = 150 bits (166), Expect = 2e-31 Identities = 371/559 (66%), Gaps = 8/559 (1%) Strand=Plus/Plus Query 33303 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 33362 ||| || |||||| ||| |||||||| || | || || |||||||| || || || Sbjct 169199 ACAGGCAAAATCGGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTCAG 169258 Query 33363 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAA 33422 || ||||| ||||||||||| || ||||| || ||||| || || | || ||||| Sbjct 169259 ACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAA 169318 Query 33423 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATG 33479 ||| || || || ||||||||||||| ||| | | || | || | |||| || Sbjct 169319 GATACCCTCAACAGCAGCAAAGGCAACAAGACGTTGAGCAAATGAGGAGTCCTTGTCCTG 169378 Query 33480 TATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 33538 ||||| | || ||||| || ||||||||| | ||||| || || || | ||| | Sbjct 169379 GATCCATCGAATG-GCCCAGTCAGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGT 169437 Query 33539 TAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACA 33598 | ||||| || || ||| | || || | || ||||| || | || || Sbjct 169438 TGAAGAGGTATGTTCTTTGGGCAGGCTCCTTGATGTAGGTATCAATGAGCAGGGAGTATG 169497 Query 33599 TTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAA 33658 | || || || ||||| || || ||||| || |||||||| |||| |||||||| | Sbjct 169498 TCTCAGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGA 169557 Query 33659 TCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTG 33718 |||| || || | ||||| || | | || || || || || || || ||| | Sbjct 169558 TCTGGACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATACCATCGGAGGCAG 169617 Query 33719 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCC 33775 | || || || | | || || || | | || |||| || | | || |||| Sbjct 169618 CGAAGAAAGCAAGAATGTGGGAGATGAAGAACTGCTCATCTGTAGTCAAACGGTTGTTCC 169677 Query 33776 AATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33835 | || | || ||| || || | ||| | || || ||||||| || || |||||||||| Sbjct 169678 AGTCGTGGAGATCCTTGGAAAGATCAATCTCCTCGGCTGTCCAGAAGGAGGCCTCTGCCT 169737 Query 33836 TTTTATACATGTTCCAGAT 33854 | || ||||| | |||||| Sbjct 169738 TCTTGTACATTTGCCAGAT 169756 >seq19 Length=300009 Score = 123 bits (136), Expect = 3e-23 Identities = 569/895 (64%), Gaps = 22/895 (2%) Strand=Plus/Minus Query 62898 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62957 || || ||||| ||||| || ||||||| || | || | || ||||||||||| Sbjct 119418 GACGCAAGATTGCAAACAGCGACCTCATCAGGGGCACAGTACTCAATGATCTCAGTGCAC 119359 Query 62958 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63017 || || | ||| || || | || | ||| || ||||| ||| || |||| Sbjct 119358 AGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCC 119299 Query 63018 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-C 63076 || || || ||||| || | || || || |||| | || | ||| || | ||| | | Sbjct 119298 TTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCAAAGC 119239 Query 63077 GACTCGAGCCTTTATTATAGATTTGTATCTCCTT----TCTCTTTCGTA--TAGTGTATA 63130 || |||||| | ||||| ||| | |||| ||||| ||||| | ||| | Sbjct 119238 TTCT-GAGCCT---TGATAGACTTGCGAC-CCTTACCCTCTCTCTCGTACTTCTCGTACA 119184 Query 63131 CAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACAT 63190 | | || |||||||| || || | | | | ||||| || || | || ||||| Sbjct 119183 GAGCC--TCAAACTCGTCACCGTAACAGTCGGCGAGACCAGGGCACTCGTTGGGGCACAT 119126 Query 63191 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63250 | | ||| || |||| | || || || |||||||| |||||||| ||||| ||||| Sbjct 119125 AAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATAAAAAGATCAGGGATCCAGAGAGC 119066 Query 63251 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63310 | || || || | | || ||||| || || |||||| ||||| ||||| Sbjct 119065 CAGGAACAGGTCACGAGCTCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAA 119006 Query 63311 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63370 | | | | || | ||||| || || | ||| || || | | ||||| || ||||| Sbjct 119005 CTCAAAGACGTCGGCGTGCCAGGGCTCAAGGTAGATAGCGAATGCACCAGGTCGCTTGTT 118946 Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430 || ||||| || | || | ||| ||||| || | || | || ||| |||| | || Sbjct 118945 GCCACCCTGGTCGACATAACGAGCAGTGTTGTTGAATACACGCAGCATGGGAACCACGCC 118886 Query 63431 GTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63490 ||| || |||| |||||||||| || || ||| ||||||| || || Sbjct 118885 GTTGGAAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATTCGGTGAACGTT 118826 Query 63491 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63550 || || || || || ||||| || || || | || || || | ||||| ||||| Sbjct 118825 TAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTGTCGTAGAT 118766 Query 63551 ACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 63610 ||| || ||||| || || |||| | | || || || |||| || | || Sbjct 118765 ACCGTCAATGCTGTCCTCCTTCATATCGACAAGGAAGCATGAGGACAGCTGAGGCTGAGG 118706 Query 63611 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63670 || || || || || | || || ||||| || || || | || || | || || Sbjct 118705 GGTACCGGCGTTGAAAAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTGGACATGAGGTT 118646 Query 63671 GTACGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCA 63726 ||| ||||| | | || ||||| || |||| || || || ||||||| Sbjct 118645 GTATGTCTCCAAGACACGCTCGATATCATCACCCCAGATG----CCAACAGCAACACGCA 118590 Query 63727 TTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGA 63781 | | |||||||||||| | ||| | || ||| | || ||||| || ||||| Sbjct 118589 TAATCATGTGCTGAGGACGCTCAGCAATTTTGCCATCAATATTCAATAAATAGGA 118535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622939716846760