Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq19 396 7e-105 seq17 107 5e-18 >seq19 Length=300009 Score = 396 bits (438), Expect = 7e-105 Identities = 1157/1755 (66%), Gaps = 58/1755 (3%) Strand=Plus/Plus Query 363434 ATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATT 363493 |||| | |||| ||| || || ||||| ||| | |||||||||||| |||| ||| | Sbjct 118554 ATGGCAAAATTGCTGAGCGTCCTCAGCACATGATTATGCGTGTTGCTGTTGGCATC---T 118610 Query 363494 GCCCGGATGTTGATGCCGCGATTG------AAACATATAAGCTTCTAAGT---GCTCGTG 363544 | || || |||| || | || | ||||| || || | || || || Sbjct 118611 G---GGGTGATGATATCGAGCGTGTCTTGGAGACATACAACCTCAT--GTCCAGCAAGT- 118664 Query 363545 TATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTT 363604 | ||||| || || | || ||| | | ||| || || || | | | || ||| |||| | Sbjct 118665 TCTTCACTCATGCTTCCCCCACACTTTTCAACGCCGGTACCCCTCAGCCTCAGCTGTCCT 118724 Query 363605 CTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGA 363664 | ||||| ||| | | |||||||| || ||| || ||||||| ||||| || |||| Sbjct 118725 CATGCTTCCTTGTCGATATGAAGGAGGACAGCATTGACGGTATCTACGACACCCTCAAGA 118784 Query 363665 ATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG 363724 |||||| | |||||||||| || || || ||||| || | ||| | |||| Sbjct 118785 CTTGTGCCATGATTTCCAAGATGGCTGGTGGTATTGGCTTAAACGTTCACCGAATCCGTG 118844 Query 363725 C-ACAGAACAGTTACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCT 363782 | || | | ||||||| ||| || || |||| | || || ||||||||||||| Sbjct 118845 CCACTGG-CTCTTACATTGCCGGTACCAACGG-TACTTCCAACGGCGTGGTTCCCATGCT 118902 Query 363783 TCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGC 363842 ||||| || |||| ||||| | || |||||||||||||| ||||| || || Sbjct 118903 GCGTGTATTCAACAACACTGCTCGTTATGTCGACCAGGGTGGCAACAAGCGACCTGGTGC 118962 Query 363843 GTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA 363902 || ||||| || || ||||| || ||||| | |||||||| ||||| ||||| || Sbjct 118963 ATTCGCTATCTACCTTGAGCCCTGGCACGCCGACGTCTTTGAGTTCCTTGATCTCCGAAA 119022 Query 363903 AAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGA 363962 ||| || || ||||| | || || ||||| |||||| || || ||| | |||| Sbjct 119023 GAACCACGGTAAGGAGGAGGTCCGAGCTCGTGACCTGTTCCTGGCTCTCTGGATCCCTGA 119082 Query 363963 CCATTTTATGAAGCGCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAA 364020 | |||||||||||| || ||| | | | | | ||| | || | ||||| |||| Sbjct 119083 TCTTTTTATGAAGCGTGTCGAG--AAGAACGGCGAATGGACTCTTATGTGCCCCAACGAG 119140 Query 364021 TGTCCAGGTCTTTCCGA-TGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGA 364079 || || ||||| |||| ||| | |||||||| | || ||||| ||||| ||||| || Sbjct 119141 TGCCCTGGTCTCGCCGACTGT-TACGGTGACGAGTTTGAGGCTCTGTACGAGAAGTACGA 119199 Query 364080 ATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGA 364139 ||||| |||| ||| ||| | || || |||||||| |||| ||||| | || Sbjct 119200 GAGAGAGGGTAAGGGTCGCAAGTCTATCAAGGCTCAGAAGCTTTGGTACGCCATTCTCGA 119259 Query 364140 TTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTC 364199 | |||| ||||| |||| |||| ||| | ||||| ||| |||||||||||| Sbjct 119260 GGCCCAGACAGAGACCGGAAACCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAG 119319 Query 364200 CAACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAAT 364258 |||||| || |||||||||| | || | || |||||| || || ||||| ||||| | Sbjct 119320 CAACCAAAAGAACCTTGGTACCA-TCCGAAGCTCCAACCTGTGCACTGAGATCATTGAGT 119378 Query 364259 ACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG 364318 || || || || ||| || || || || |||||||| | | || || | || Sbjct 119379 ACTGTGCCCCTGATGAGGTCGCTGTTTGCAATCTTGCGTCCTTGTCTCTGCCTTCTTTCA 119438 Query 364319 TAA------AAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAAC-CTA-TCATGC 364370 | | |||||| | | ||| | || | || | || || || | | || | Sbjct 119439 TTAACTATGAAGATGCTTGCTACGACTTCAAGAAGCTCCACGATGTTACTCGAGTCGTTG 119498 Query 364371 TACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG--- 364426 | | |||| || | ||| | || ||| || |||| || | | || || || Sbjct 119499 TCC--GCAACCTGAATAAGATCATTGACGTAAACCATTACCCTGTGCAAGAGGCTCGCAA 119556 Query 364427 -AGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTT 364485 ||| || |||||||| || || ||||| ||||| || || || || ||||| | Sbjct 119557 CAGC-----AACATGCGTCACCGACCCATTGGCCTTGGCGTTCAAGGTCTTGCTGATGCC 119611 Query 364486 TTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATC 364545 || | || ||| | || || || ||||| ||||||| || || ||| | ||| Sbjct 119612 TTCCTTGCACTTCGCATGCCCTTCGAGTCTCCTGAGGCTCGTGAGCTGAACAAGCAAATC 119671 Query 364546 TTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGG 364604 ||||| ||||| || || || | || | || |||| | | || || |||| Sbjct 119672 TTTGAGACAATCTACCACGCTGCCCTTACCACCTC-TGTGCAGCTCGCCAAGGAGGAGGG 119730 Query 364605 AAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATG 364664 ||||| || | |||| || || ||| |||| | |||||||||| | || Sbjct 119731 CCCTTACTCCACCTTCAAGGGCTCTCCCGCTTCTGAGGGTATTCTCCAGTTTGACATGTG 119790 Query 364665 GAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCA 364724 |||||||| ||| |||| || ||| ||||||| | ||||| | || |||| ||| Sbjct 119791 GAATGTCAAGCCCTCTGACCTTTGGGACTGGGAGTCCCTACGGGAGGATGTAAAGACGCA 119850 Query 364725 TGGTACTCGCAAC--TC-CCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGAT 364781 |||| || ||| || |||||| || || ||||| || || || | ||||| Sbjct 119851 CGGTATCCGTAACAGTCTACTCGTT---GCTCCTATGCCTACTGCCAGCACGTCGCAGAT 119907 Query 364782 CCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCT 364841 || || ||||||||||||||||| || | || |||| | || |||||| || || Sbjct 119908 TCTTGGCAACAACGAGTGCTTCGAGCCCTACACCTCCAATATCTACCAACGCCGAGTCCT 119967 Query 364842 TTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCT 364901 | | || ||||| | ||| || || | || | ||||||||| |||| || || Sbjct 119968 TGCTGGCGAATTCCAGGTTGTCAACCCCTGGCTTCTGAAGGATCTTGTCGACTTGGGCCT 120027 Query 364902 GTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCC 364961 ||| || ||||||||| |||||| || | ||| |||||||| |||||||| || Sbjct 120028 TTGGTCCGATGCTATGAAGAACCGTATCATTGCTGATAACGGTTCTGTCCAGAACATCCC 120087 Query 364962 AGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAAC 365021 | || | ||| | ||| || | ||||| || || ||||||||||| |||| Sbjct 120088 CAACATCCCTGCCGATGTCAAGGCTCTGTACAAGACTGTGTGGGAAATTTCTCAGCGACA 120147 Query 365022 TCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGT 365081 | | | ||||| || || || ||||| || || |||| ||||| | ||| | Sbjct 120148 GGTTGTGCAAATGGCTGCGGACCGTGGTGCCTTCATTGATCAGTCTCAGTCTCTCAACAT 120207 Query 365082 ATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATC 365141 ||||| | || ||| | ||| | || |||||| || || ||||| Sbjct 120208 TCACATGAAGGACCCTACCATGGGTAAGATCACCAGCATGCACTTTGCTGGCTGGAAGCT 120267 Query 365142 CGGTCTTAAGACAGG 365156 |||||| ||||| || Sbjct 120268 CGGTCTCAAGACCGG 120282 >seq17 Length=315547 Score = 107 bits (118), Expect = 5e-18 Identities = 150/210 (71%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 22438 AATAAGGCAGATTGGGCGCTGAAATGGAT---GAACAATGAACGTTCATTCGCGGAACGT 22494 || ||||| || ||||| | |||||| | |||| || ||||| || ||||| Sbjct 169408 AAGAAGGCTGACTGGGCCATTCGATGGATCCAGGACAAGGACTCCTCATTTGCTCAACGT 169349 Query 22495 CTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTT 22554 ||| |||| ||||||| ||||| || || ||||| || || ||| | ||||| Sbjct 169348 CTTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTC 169289 Query 22555 TGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGA 22614 ||||| || || |||| | ||||| ||||| || || || || ||| | || ||| Sbjct 169288 TGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCCCGT 169229 Query 22615 GATGAGGGTCTTCATACCGATTTTGCGTGT 22644 |||||||||||||| ||||||||||| ||| Sbjct 169228 GATGAGGGTCTTCACACCGATTTTGCCTGT 169199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303337552051502