Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq19 147 2e-30 seq81 129 6e-25 seq126 116 3e-21 seq82 107 2e-18 >seq19 Length=300009 Score = 147 bits (162), Expect = 2e-30 Identities = 826/1297 (64%), Gaps = 43/1297 (3%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| ||||| || ||||| || | || || || || | || || ||| |||| Sbjct 119991 TTGACAACCTGGAATTCGCCAGCAAGGACTCGGCGTTGGTAGATATTGGAGGTGTAGGGC 119932 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || ||||||| ||||| || || || | || | || || ||||| || || Sbjct 119931 TCGAAGCACTCGTTGTTGCCAAGAATCTGCGACGTGCTGGCAGTAGGCATAGGAGCAACG 119872 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | || || || | |||||| |||| | || ||| ||| | |||| ||||| Sbjct 119871 AGTAGACTGTTACGGATACCGTGCGTCTTTACATCCTCCCGTAGGGACTCCCAGTCCCAA 119812 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || || ||| | || | ||||||||| |||| | ||| ||||| ||||| | Sbjct 119811 AGGTCAGAGGGCTTGACATTCCACATGTCAAACTGGAGAATACCCTCAGAAGCGGGAGAG 119752 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCA-ACTCGCCTCCAGAGC 145356 || | |||| |||| |||| |||||||||| ||| | | || || Sbjct 119751 CCCTTGAAGGTGGAGTAAGGGCCCTCCTCCTTGGCGAGCT-GCACAGAGGTGGTAAGGGC 119693 Query 145357 GCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTA 145416 || || |||||||| |||||| |||| ||| || ||| |||| | Sbjct 119692 AGCGTGGTAGATTGTCTCAAAGATTTGCTTGTTCAGCTCACGAGCCTCAGGAGACTCGAA 119633 Query 145417 CGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCG 145476 |||||||| || | || ||||| || || || || | || | ||| ||||| || Sbjct 119632 GGGCATGCGAAGTGCAAGGAAGGCATCAGCAAGACCTTGAACGCCAAGGCCAATGGGTCG 119573 Query 145477 ATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATA-TCGATTACGGTCGATAATTT 145535 || ||||||||| | | ||| | | ||| || | | ||||| || || || | Sbjct 119572 GTGACGCATGTTGCTGTTGCGAGCCTCTTGCACAGGGTAATGGTTTACG-TCAATGATCT 119514 Query 145536 TATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGAG 145595 |||||| ||| || || || || |||| | | | ||| | ||||| | | || Sbjct 119513 TATTCAGGTTGCGGACAACGACTCGAGTAACATCGTGGAGCTTCTTGAAGTCGTAGCAAG 119454 Query 145596 CCTCGTCAACG---ACCACACA-GCTATTGACGGCGATCGACGCCAAATTACAAACTGCC 145651 | || ||| | | | | | | | ||| | ||||| | ||| ||||| || Sbjct 119453 CATCTTCATAGTTAATGAAAGAAGGCAGAGAC----AAGGACGCAAGATTGCAAACAGCG 119398 Query 145652 GTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTT 145711 ||| || | | | | ||| | | |||||| | ||||| ||| | | |||||| Sbjct 119397 ACCTCATCAGGGGCACAGTACTCAATGATCTCAGTGCACAGGTTGGAGCTTCGGATGGTA 119338 Query 145712 CCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCG 145771 || || || | || || || || | |||||| ||||||||||||||| | || Sbjct 119337 CCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTT 119278 Query 145772 CCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGC--AAG-TCCTGCGC----ACGCAC 145824 || ||||| ||| | ||| || || || | ||| | ||| || | || Sbjct 119277 CCGGTCTCTGTCTGGGCCTC---GAGAATGGCGTACCAAAGCTTCTGAGCCTTGATAGAC 119221 Query 145825 CTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACC 145884 ||| | || |||||| ||||| ||| ||| || |||||||| || ||| Sbjct 119220 TTGCGACCCTTA----CCCTCTCTCTCGTACTTCTCGTACAGAGCCTCAAACTCGTCACC 119165 Query 145885 GTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGC 145944 ||| || |||| || || || |||| |||||| ||||| || | |||| ||||||| Sbjct 119164 GTAACAGTCGGCGAGACCAGGGCACTCGTTGGGGCACATAAGAGTCCATTCGCCGTTCTT 119105 Query 145945 GTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTT 146004 | ||| |||| |||||| | ||| || | ||| || || | || ||| || ||| Sbjct 119104 CTCGACACGCTTCATAAAAAGATCAGGGATCCAGAGAGCCAGGAACAGGTCACGAGCTCG 119045 Query 146005 GCAATCCTCAGCACCCATGTTTCGCTTC--AAATTAAGCACACT-ATAGATGTCCGCGTG 146061 | ||||| ||| || ||| ||| | || ||| | ||| | ||| ||| ||||| Sbjct 119044 GACCTCCTCCTTACCG-TGGTTCT-TTCGGAGATCAAGGA-ACTCAAAGACGTCGGCGTG 118988 Query 146062 CCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTTG---CCACCCTGGTCCACGTG 146118 ||| || |||| |||| |||| || || ||| ||| ||||||||||| || | Sbjct 118987 CCAGGGCTCAAGGTAGATAGCGAATGCACCAGGTCGCTTGTTGCCACCCTGGTCGACATA 118928 Query 146119 ACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGT 146178 ||| | ||||||| || || |||| |||||| | |||||| ||| ||||| || Sbjct 118927 ACGAGCAGTGTTGTTGAATACACGCAGCATGGGAACCACGCCGTTGGAAGTACCGTTGGT 118868 Query 146179 AGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC-GC 146237 | | || | ||| || || | | ||||| || | ||| | ||| || || Sbjct 118867 ACCGGCAATGTAAGAGCCAGTGGCACGGATTCGGTGAACGTTTAAGCCAATACCACCAGC 118808 Query 146238 CGTACTTGGATATAGCGGCGC-AGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC- 146295 | | |||||| || ||| | |||| ||| || |||||||| ||||||||||| || Sbjct 118807 CAT-CTTGGAAATCATGGCACAAGTC-TTGAGGGTGTCGTAGATACCGTCAATGCTGTCC 118750 Query 146296 -GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTG 146331 |||| || ||| || ||||| ||| ||| ||| Sbjct 118749 TCCTTC--ATATCGACAAGGAAGCATGAGGACAGCTG 118715 >seq81 Length=153540 Score = 129 bits (142), Expect = 6e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || ||||| | || | |||||||| ||||| |||||||| || Sbjct 143876 CCACCACGAAGGCGAAGCACAAGGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCAGAG 143817 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| ||||||||||| ||| | || || ||||||||||| ||||| Sbjct 143816 AGGGTACGACCGTCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGA 143757 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | |||||| | ||||||| Sbjct 143756 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCAGATGACTCGACC 143697 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 || | ||| | ||| || ||||| || || || ||||| || ||||||| Sbjct 143696 TCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCATGA 143648 Score = 122 bits (134), Expect = 8e-23 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | || | |||||||| ||||| |||||||| ||| Sbjct 144158 CCACCACGAAGACGAAGCACAAGGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCGGAG 144099 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| |||||||| || ||| |||| | ||||||||||| ||||| Sbjct 144098 AGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCAGGAGGA 144039 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | |||||| | ||||||| Sbjct 144038 ATACCTTCCTTGTCCTGGATCTTAGACTTGACGTTGTCGATAGTATCAGATGACTCGACC 143979 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 || | ||||| ||| || || || || || || |||| Sbjct 143978 TCAAGGGTAATGGTCTTGCCAGTAAGGGTCTTGACGA 143942 >seq126 Length=117423 Score = 116 bits (128), Expect = 3e-21 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| || |||||||| ||||||| |||||| ||||| |||||||| || Sbjct 31049 GTAGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCA 30990 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 || |||| | |||||||||||||| || || || || ||||| ||| || |||| Sbjct 30989 GCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 30930 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || |||| ||||| | || | ||| | || || || || || || Sbjct 30929 ACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTC 30870 Query 131218 TTTACGAAAATCTGCATGA 131236 || |||||||||||||||| Sbjct 30869 TTGACGAAAATCTGCATGA 30851 >seq82 Length=153091 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | || |||||||| || |||||||| ||| Sbjct 10468 CCACCACGGAGACGGAGAACAAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAG 10409 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| ||||||||||| ||| |||| || ||||| |||||||| || Sbjct 10408 AGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGTTGGTCCGGGGGA 10349 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | |||||||| Sbjct 10348 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACC 10289 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAA 131226 |||| ||| | ||| || || || || || || |||||| Sbjct 10288 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAA 10250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472007129946240