Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq337 140 2e-28 seq322 122 6e-23 seq351 107 1e-18 seq9 89.7 3e-13 >seq337 Length=3204 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1448 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 1389 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1388 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1354 >seq322 Length=6685 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||| ||||||||| ||||||||||| || |||||| | Sbjct 3599 AAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGACAGTAGATAGGGACAGTGGGAATCTCAT 3658 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||| ||||||||||| Sbjct 3659 TAATCCATTCATGCGCGTCACTAGTTAGATGACGA 3693 Score = 113 bits (124), Expect = 3e-20 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 5868 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 5927 Query 20007 GGTAATATTTAGCCTTA 20023 |||||||||| ||| Sbjct 5928 ACCAATATTTAGCTTTA 5944 >seq351 Length=2184 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||| | Sbjct 1653 CTCTCTCTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 1712 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 1713 GCCAATATTTAGCTTTA 1729 >seq9 Length=380760 Score = 89.7 bits (98), Expect = 3e-13 Identities = 67/79 (85%), Gaps = 5/79 (6%) Strand=Plus/Minus Query 25916 GGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCATGC 25970 || |||||||||| |||||||||||||||| || |||||||| ||||| ||||||| Sbjct 225330 GGTTGTGGTTTCGGTAGATAGTAGATAGGGATAGTGGGAATCTCGTCAATCCATTCATGC 225271 Query 25971 GCGTCACTAATTAGATGAC 25989 || ||||||||| |||||| Sbjct 225270 GCATCACTAATTCGATGAC 225252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334943277035591