Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq17 170 2e-37 >seq17 Length=315547 Score = 170 bits (188), Expect = 2e-37 Identities = 377/560 (67%), Gaps = 9/560 (2%) Strand=Plus/Plus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || ||||| ||||| || | ||| || || || || || | ||| ||| ||| || | | Sbjct 169200 CAGGCAAAATCGGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTCAGA 169259 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 || || | || || || ||||||||||| || || || ||||| ||| || || Sbjct 169260 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAG 169319 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG--C 93269 ||||| || || || ||||| || |||| ||||| ||||| || ||| | || | Sbjct 169320 ATACCCTCAACAGCAGCAAAGGCAACAAGACGTTGAGCAAA---TGAGGAGTCCTTGTCC 169376 Query 93270 TG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328 || |||||| | ||||| || || || || || ||||| | || || | ||| Sbjct 169377 TGGATCCATCGAATGGCCCAGTCAGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCG 169436 Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388 || || ||||| || | | | | || ||||| ||||| || | ||| || || Sbjct 169437 TTGAAGAGGTATGTTCTTTGGGCAGGCTCCTTGATGTAGGTATCAATGAGCAGGGAGTAT 169496 Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448 | ||||| |||| |||||||| || ||||| |||||||| |||| ||| || | | Sbjct 169497 GTCTCAGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCGGGG 169556 Query 93449 ATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCT 93508 ||||| || || |||| ||| || || || || ||||| ||||||||||| || Sbjct 169557 ATCTGGACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATACCATCGGAGGCA 169616 Query 93509 GCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATC-ATCTTTAA--GCTTATCC 93565 || || ||||| | || || || || | |||||| | | || | || | | Sbjct 169617 GCGAAGAAAGCAAGAATGTGGGAGATGAAGAACTGCTCATCTGTAGTCAAACGGTTGTTC 169676 Query 93566 CAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 || ||| ||||| || |||||||| | || ||| | ||||| || || || ||||| Sbjct 169677 CAGTCGTGGAGATCCTTGGAAAGATCAATCTCCTCGGCTGTCCAGAAGGAGGCCTCTGCC 169736 Query 93626 TTTTTGTACATATCCCATAT 93645 || |||||||| | ||| || Sbjct 169737 TTCTTGTACATTTGCCAGAT 169756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556854110709640