Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq81 179 7e-40 seq126 167 4e-36 seq82 154 3e-32 seq17 131 3e-25 seq3 107 4e-18 seq547 95.1 2e-14 >seq81 Length=153540 Score = 179 bits (198), Expect = 7e-40 Identities = 179/232 (77%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || |||||||| | || | ||| || || ||||||||||||||||| || || ||| Sbjct 143876 CCACCACGAAGGCGAAGCACAAGGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCAGAG 143817 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || | || || ||||| || ||| Sbjct 143816 AGGGTACGACCGTCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGA 143757 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| || ||||| | |||||| ||||| || || | ||| || || Sbjct 143756 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCAGATGACTCGACC 143697 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGC 68466 || | ||||||||| || || ||||||||||||||||| || ||||| |||| Sbjct 143696 TCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCATGATGC 143645 Score = 163 bits (180), Expect = 5e-35 Identities = 168/220 (76%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | ||| || || ||||||||||||||||| || |||||| Sbjct 144158 CCACCACGAAGACGAAGCACAAGGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCGGAG 144099 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || |||| || ||||| || ||| Sbjct 144098 AGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCAGGAGGA 144039 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| || ||||| | ||||||| ||||| || || | ||| || || Sbjct 144038 ATACCTTCCTTGTCCTGGATCTTAGACTTGACGTTGTCGATAGTATCAGATGACTCGACC 143979 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATA 68454 || | ||| ||||| || || || ||||||||||||| || Sbjct 143978 TCAAGGGTAATGGTCTTGCCAGTAAGGGTCTTGACGACTA 143939 >seq126 Length=117423 Score = 167 bits (184), Expect = 4e-36 Identities = 176/232 (76%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || || ||||| || |||||||| || ||| Sbjct 31079 CCACCACGGAGGCGGAGGACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 31020 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || |||| || ||||| || ||| Sbjct 31019 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGA 30960 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| || |||||||| | || || || Sbjct 30959 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 30900 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGC 68466 || | |||||| || || |||||||||||||||||||| |||||||| |||| Sbjct 30899 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATGATGC 30848 >seq82 Length=153091 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || || ||||| || |||||||| || |||||| Sbjct 10468 CCACCACGGAGACGGAGAACAAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAG 10409 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || | || |||||||| || ||| Sbjct 10408 AGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGTTGGTCCGGGGGA 10349 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | |||||| ||||||||||| | || || || Sbjct 10348 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACC 10289 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || | ||||||||| || ||||| |||||||| ||||| Sbjct 10288 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 10251 >seq17 Length=315547 Score = 131 bits (144), Expect = 3e-25 Identities = 557/865 (64%), Gaps = 29/865 (3%) Strand=Plus/Plus Query 9938 GACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAG 9997 ||| || ||||| ||||| || | || || |||||| ||||||| |||||| | || Sbjct 168899 GACACCGGCCTTTTGGTAGTCGGCAACGCGCTTCTCGAAAAAGTTGGTCTTGCCACCAAG 168958 Query 9998 GGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAG 10057 || ||| |||||||||||| |||||||| ||| || ||| | |||||| Sbjct 168959 AGAGATGTTCTCCATGAAGTCGAAGGGGTTTGTGGCCTTGTACACCTTCTCATTACCGAG 169018 Query 10058 TGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCAT 10117 || || | || ||||||||||||||||||||||| |||| |||| |||||||| Sbjct 169019 AGCAACGAGCAGACGATCAGCCACGAACTCGATGTACTGCTTCATGAGGTTGGAGTTCAT 169078 Query 10118 GCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTC 10177 ||| | | | || |||| || ||| || ||| |||| ||| ||| || || || Sbjct 169079 GCCTAGAAGACCACAAGGGAGAGCCTCGGTAAGGAACTCCTGCTCGATGGTAACGGCATC 169138 Query 10178 CTCGACGATGCTCTTTACCA----CGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATACA 10233 || |||| || | || | | || || | || || | || | | Sbjct 169139 GGTGATGATGTCCTGGATCATCTGCTTGCTGGCACGTC----CCTTAAGGTGAGAGTGGA 169194 Query 10234 GGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAAC 10293 |||| |||| | ||| || ||||| || ||| ||||| ||||||||| || Sbjct 169195 GGAGACAGGCAAAATCGGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGG 169254 Query 10294 CCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGA 10353 |||||| |||||||| || || || |||||||| |||| | || | ||| || Sbjct 169255 TCAGACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGA 169314 Query 10354 ACAGAAGACCCTCCAC-GCACACCCAGGCGACGAGGCGCTCTGCGAAGGAGCGGTCGCGC 10412 | | | |||||| || ||| | |||| || || || | || || ||| ||| | Sbjct 169315 AGAAGATACCCTCAACAGCA-GCAAAGGCAACAAGACGTTGAGCAAATGAGGAGTC-CTT 169372 Query 10413 GAAAAGTAT--TTCGA--GGCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGAT 10468 | | || |||| |||||| | |||||||||| | | ||| || || || | Sbjct 169373 GTCCTGGATCCATCGAATGGCCCAGTCAGCCTTCTTTCGGATGCAAGGAATAGTGTCAAC 169432 Query 10469 AGCCTCGAAGAGCT-TGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGGG 10527 || | |||||| | |||| | | || |||| || | ||||| |||||||| Sbjct 169433 GGCGTTGAAGAGGTATGTT-CTTTGGGCAGGCTCCTTGATGTAGGTATCAATGAGCAGGG 169491 Query 10528 AGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAA-CATACGTGCC 10586 ||||| ||| ||||| | |||| | |||| || ||||||| ||| || ||| Sbjct 169492 AGTATGTCTCAGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAT-CGAGCC 169550 Query 10587 GAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTC-AGGTTCTCCATCACCATGCCATC 10645 |||| | ||| | | | || | | | | | |||||||| | || || ||||| Sbjct 169551 TCGGGGATCTGGACCT-CGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATACCATC 169609 Query 10646 GCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATC----ATCGTTCA 10701 | | | || ||||| | || ||||| ||||||| ||||||| || | Sbjct 169610 GGAGGCAGCGAAGAAAGCAAGAATGTGGGAGATGAAGAACTGCTCATCTGTAGTCAAACG 169669 Query 10702 GTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAG 10761 ||| || |||||| | ||||| | || | | |||||| | |||||||| | Sbjct 169670 GTTGTT----CCAGTCGTGGAGATCCTTGGAAAGATCAATCTCCTCGGCTGTCCAGAAGG 169725 Query 10762 TGGCAACGGCCTTCTTGTACATCTG 10786 ||| | |||||||||||||| || Sbjct 169726 AGGCCTCTGCCTTCTTGTACATTTG 169750 >seq3 Length=622283 Score = 107 bits (118), Expect = 4e-18 Identities = 439/676 (65%), Gaps = 37/676 (5%) Strand=Plus/Plus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||| | || ||| |||| || ||||| || || || |||||| Sbjct 507250 CGCCACTGGATGTACTCGGAAGGAGTCTTGTCGAGATGGTTATCGATGTGAGCGAAAGCG 507309 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGT-CGG 225099 ||||| | ||| || || || ||||| |||| | | ||| | || || Sbjct 507310 TGCTGCTTAATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATTTCACCCTGGGTAGGG 507369 Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159 || | ||| ||||||||||| ||||| || |||| |||||| ||||| ||||| || || Sbjct 507370 ATGAG-CTCACCGGTGAGGACGTTGATCAGTGTAGACTTGCCAGCACCGTTGGGACCGAT 507428 Query 225160 CACGCCAATCCGGGATGACATTGCAACCTG---CGAGTTCACGTTG--CTGAAGATCTCA 225214 ||| | || || ||| || | ||| ||| | || || ||| | | | Sbjct 507429 AACGGCGATACGAGATCCCAGAGAGCACTGGAAGGAGATGTCGCTGATCTGGGGCTTGGA 507488 Query 225215 GG-GCCAGTTTGGTAAGCAAAGGCCA------CGCCACGCAGCTTCATGATGGCACGGTC 225267 || ||| | | || |||| || | |||| || ||||| | | Sbjct 507489 GGTGCCGG---GATACTGGAAGGACATGTTGGTGGCACGGAG------AATGGCCTTGGC 507539 Query 225268 CTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTC 225327 ||||| | | |||||| ||||| |||||||||||||| ||| | || | | || Sbjct 507540 CTTGGTCTTGACACCCTCAAGGAAACCGGGCTCGGGGAAGCTGAACTCGATCTCGGACTC 507599 Query 225328 CTTCAGGTCGTAGTAAGATGCAGC-CTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTC 225386 || || ||||| || ||| |||| || || |||||||||| |||||| | Sbjct 507600 GCCAAGCTCATAGTAGGACTTAGCGGAAGGGTTGC-GGGCGACGAAAGCAGCCAGGTTAC 507658 Query 225387 CGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACTGCG 225445 | || | ||||||||| || |||||| ||||| || ||| | ||| || | Sbjct 507659 CCTTGTAACGCTTGAGCTTGA--ATC-GCTCGTAGTGAACGATGTGCTG-GCAGACGTTG 507714 Query 225446 TCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACG-ACACGTTCGTCAG-GCCCTTGA 225503 |||||||| ||||||||||| || || |||||||| | || | ||| | ||||| Sbjct 507715 TCAAGGAAACCAGAGTCGTGAGAGACGATGATGGAAGTGCAAG-----CAGAGTTCTTGA 507769 Query 225504 GGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAA 225563 ||| | |||||| ||||| | || |||| ||||| ||||| ||||| || | Sbjct 507770 GGTACTCCTCGAGCCACTTAACGTTCTTCACATCCAAATGGTTGGTAGGCTCGTCGAGCA 507829 Query 225564 GCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCC 225623 ||| || || | | | || || ||| || | | |||||||| ||||| || | Sbjct 507830 ACAGAATATCGGGAGCCTCGAAGACGGCACGGCACAAGGCGAGCTTCATCTTCCAACCAC 507889 Query 225624 CGGACAGGGAGCCGAT 225639 | || |||| || ||| Sbjct 507890 CAGAGAGGGCGCTGAT 507905 >seq547 Length=561 Score = 95.1 bits (104), Expect = 2e-14 Identities = 60/65 (92%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||| |||||||||||| |||||||||| ||||||| ||||||||||||||||||||| Sbjct 336 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 277 Query 84516 CCCAC 84520 ||||| Sbjct 276 CCCAC 272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921611329010920