Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq19 345 8e-90 seq17 329 6e-85 >seq19 Length=300009 Score = 345 bits (382), Expect = 8e-90 Identities = 895/1348 (66%), Gaps = 51/1348 (4%) Strand=Plus/Minus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 ||| || ||||| || || || | || || ||||| ||||||| ||| | || || Sbjct 119992 GTTGACAACCTGGAATTCGCCAGCAAGGACTCGGCGTTGGTAGATATTGGAGGTGTAGGG 119933 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||||| || ||| ||||||| || ||||||| |||||| ||||| ||||| || | || Sbjct 119932 CTCGAAGCACTCGTTGTTGCCAAGAATCTGCGACGTGCTGGCAGTAGGCATAGGAGCAAC 119873 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGA--TGCGGA-GTCTGAGCTCGTTCCAGTC 244266 || |||||||| | | |||||| ||| | | | || | ||| |||||| Sbjct 119872 GAGTAGACTGTTACGGATACCGTGCGTCTTTACATCCTCCCGTAGGGACTC---CCAGTC 119816 Query 244267 CCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTT 244326 ||| | | | ||||| | | | || ||||||||||||||| || | |||| Sbjct 119815 CCAAAGGTC--AGAGGGCTTGACATT-------CCACATGTCAAACTGGAGAATACCCT- 119766 Query 244327 GCTGA--CGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACA 244383 | || |||| ||||| | |||| | ||| || || || || ||| |||| ||| Sbjct 119765 -CAGAAGCGGGAGAGCCCTTGAAGGTGGAGTAAGGGCCCTCCTCCTTGGCGAGCTGCACA 119707 Query 244384 GCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGC 244443 | | || ||||| |||| |||||| ||||| ||||| |||||||| || || || Sbjct 119706 GAGGTGGTA-AGGGCAGCGTGGTAGATTGTCTCAAAGATTTGCTTGTTCAGCTCACGAGC 119648 Query 244444 CTTGCCGCAGGT--GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACG 244501 || | | || |||||| |||| | | |||| | || || || || || ||| Sbjct 119647 CT--CAGGAGACTCGAAGGGCATGCGAAGTGCAAGGAAGGCATCAGCAAGACCTTGAACG 119590 Query 244502 CCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAG 244561 || | ||| ||||||| ||| ||| ||||| | || || |||| |||||| | Sbjct 119589 CCAAGGCCAATGGGTCGGTGACGCATGTTGCTGTTGCGAGCCTCTTGCACAGGGTAATGG 119530 Query 244562 TTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGC 244621 || |||| || | ||| || ||||||||| | | || || ||| ||| | Sbjct 119529 TTTACGTCAATGATCTTATTCAGGTTGCGGACAACGACTCGAGTAACATCGTGGAGCTTC 119470 Query 244622 TGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCG 244681 | |||||||| | | | ||| || | | ||| | || | || | Sbjct 119469 TTGAAGTCGTA---GCAAGCATCTTCATAGTTAATGA-----AAGAAGGCAGAGACAAGG 119418 Query 244682 ACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTG 244741 |||| || ||||| || || ||||| || | | ||||| | ||||| ||| Sbjct 119417 ACGCA----AGATTGCAAACAGCGACCTCATCAGGGGCACAGTACTCAATGATCTCAGTG 119362 Query 244742 CAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCG 244801 || ||||| || |||||| || |||| || || ||| |||| ||||||| Sbjct 119361 CACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGA 119302 Query 244802 TCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAG 244861 |||||||||||||||||||| |||||||| |||||| |||| | | || ||| Sbjct 119301 TCCTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCAA 119242 Query 244862 AGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGG 244921 || | | |||||||| | | ||||| |||| |||||| |||||| |||||| Sbjct 119241 AGCTTCTGAGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCGTACAGA 119182 Query 244922 GCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGA 244981 ||||| |||||| || | ||| | || || |||||| |||||||| ||| Sbjct 119181 GCCTCAAACTCGTCACCGTAACAGTCGGCGAGACCAGGGCACTCGTTGGGGCACATAAGA 119122 Query 244982 CTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGG 245041 |||| |||||| | || ||| | || ||| || || || ||||||||||| ||| || Sbjct 119121 GTCCATTCGCCGTTCTTCTCGACACGCTTCATAAAAAGATCAGGGATCCAGAGAGCCAGG 119062 Query 245042 AAGAGGTCCCTGGTCCTCTG--CTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGT 245099 || ||||| | | ||| | ||| ||| || |||||| | || || | || | Sbjct 119061 AACAGGTCAC--GAGCTCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACT 119004 Query 245100 CAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGC 245159 ||||||||||| ||||||||||||| | ||||| ||||| || || || |||||||||| Sbjct 119003 CAAAGACGTCGGCGTGCCAGGGCTCAAGGTAGATAGCGAATGCACCAGGTCGCTTGTTGC 118944 Query 245160 CTCCCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATG 245215 | |||||||| | | | ||||| |||||| | ||||| | || || | | Sbjct 118943 CACCCTGGTCGA----CATAACGAGCAGTGTTGTTGAATACACGCAGCATGGGAACCACG 118888 Query 245216 CCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTG-AT 245274 ||||| || |||||||| || ||||| | ||| || | | || | | || | Sbjct 118887 CCGTTGGAAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGA-TTCGGTGAAC 118829 Query 245275 GGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGC 245334 | | ||| | || || || |||||| || | ||| || |||||| |||||| Sbjct 118828 GTTTAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTGTCGTA 118769 Query 245335 TATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTT 245394 || || || ||||||||| |||||| | || || ||||| ||||||||||| |||| Sbjct 118768 GATACCGTCAATGCTGTCCTCCTTCATATCGACAAGGAAGCATGAGGACAGCTGAGGCTG 118709 Query 245395 GGGGCTGCACGAGTTGAACAGAGTGGGG 245422 ||| | | | |||||| || |||||| Sbjct 118708 AGGGGTACCGGCGTTGAAAAGTGTGGGG 118681 >seq17 Length=315547 Score = 329 bits (364), Expect = 6e-85 Identities = 595/856 (70%), Gaps = 22/856 (3%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || |||| |||||| |||||||||||||| || Sbjct 169756 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCCGAGGAGATTGATCTT 169697 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAAC----GAAAAGTTTTTCCTCAA 42415 ||||||| || |||| | || || ||| || || |||| ||| || Sbjct 169696 TCCAAGGATCTCCACGACTGGAACA-ACCGTTTGACTACAGATGAGCAGTTCTTCATCTC 169638 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 |||| || || |||||||| ||||| || || || ||||| |||||||| | | Sbjct 169637 CCACATTCTTGCTTTCTTCGCTGCCTCCGATGGTATCGTCAACGAGAACCTTGTTGAGCG 169578 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||| ||||| ||| | ||||| || ||||||||||| |||||||| || Sbjct 169577 ATTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTACGGTTTCCAGATCATGAT 169518 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCC 42592 |||||| | ||||||||| ||| || ||||||| | || |||||| ||| || Sbjct 169517 GGAGAACATCCACTCTGAGACATACTCC---CTGCTCATTGATACCTACATCAAGGAGCC 169461 Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGC 42652 | | | | | || ||||| ||| | || || || || |||||| |||||||| Sbjct 169460 TGCCCAAAGAACATACCTCTTCAACGCCGTTGACACTATTCCTTGCATCCGAAAGAAGGC 169401 Query 42653 GGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGC 42712 |||||||| | |||||| || ||| | | || | | | || || || Sbjct 169400 TGACTGGGCCATTCGATGGATCCAGGACAAGGACTCCTCATTTGCTCAACGTCTTGTTGC 169341 Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772 |||| | || || ||||| ||||||||| || ||||| |||||||||||||||||||| Sbjct 169340 CTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCAA 169281 Query 42773 GCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 | || || || ||||| || || |||||||| ||||| |||||| | | || |||| Sbjct 169280 GAAGCGTGGCCTC-ATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCCCGTGATGAGG 169222 Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACC-TCAGGCACAAGCCCTCG 42890 | || || | || |||||||| ||||| ||| |||| | ||| || ||| | Sbjct 169221 GTCTTCACACCGATTTTGCCTGTCTCCTCCACTC---TCACCTTAAGGGACGTGCCAGC- 169166 Query 42891 AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950 ||| || | ||| || ||||||||| || ||||| |||||| |||||||||| || Sbjct 169165 AAGCAGATGATCCAGGACATCATCACCGATGCCGTTACCATCGAGCAGGAGTTCCTTACC 169106 Query 42951 CAGTCGCTGCCCGTGT-CCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCA 43009 || | || ||| ||| || | ||||||||| | |||||||| |||||||| | Sbjct 169105 GAGGCTCT-CCCTTGTGGTCTTCTAGGCATGAACTCCAACCTCATGAAGCAGTACATCGA 169047 Query 43010 GTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGT 43068 || ||| || || | ||| || || | || | || | | ||||| | | Sbjct 169046 GTTCGTGGCTGATCGTCTGCTCGTTGCTCTCGGTAATGAGAAG-GTGTACAAGGCCACAA 168988 Query 43069 GCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGC 43128 |||||||||||| |||||||||||||| | | ||||||||||||||||||||||||| Sbjct 168987 ACCCCTTCGACTTCATGGAGAACATCTCTCTTGGTGGCAAGACCAACTTTTTCGAGAAGC 168928 Query 43129 GCGTCGCCGACTACCA 43144 |||| ||||||||||| Sbjct 168927 GCGTTGCCGACTACCA 168912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944327856125360