Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq126 102 9e-17 seq81 95.1 1e-14 >seq126 Length=117423 Score = 102 bits (112), Expect = 9e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || ||| || || | || || |||||||||||||| || Sbjct 31044 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAA 30985 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || |||||||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 30984 GATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 30926 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | |||||| || ||||| || | ||||| || || ||||| || ||||| | Sbjct 30925 TGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGA 30866 Query 42196 CAAAGATTTGCAT 42208 | || || ||||| Sbjct 30865 CGAAAATCTGCAT 30853 >seq81 Length=153540 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| ||||| || ||||| |||| || || || |||| || |||||||| || ||||| Sbjct 143841 CTCTTTTTGGATGTTGTAGTCAGAGAGGGTACGACCGTCCTCGAGCTGCTTGCCGGCGAA 143782 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | |||||||||||| | || | || ||||||||| ||| || |||| | Sbjct 143781 AATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGACTTGACATT 143722 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | || || || || || || | |||||||| ||||| || || ||||| || Sbjct 143721 GTCGATAGTATCAGATGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 143662 Query 42197 AAAGATTTGCAT 42208 ||||||||||| Sbjct 143661 GAAGATTTGCAT 143650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543206274656240