Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq81 132 5e-26 >seq81 Length=153540 Score = 132 bits (146), Expect = 5e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| || || | ||||| |||||||| |||||||| || | || ||| || |||| Sbjct 143862 AAGCACAAGGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCAGAGAGGGTACGACCGTC 143803 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || |||||||||||||| |||| | ||||||||||| |||||||| ||||| || || Sbjct 143802 CTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTC 143743 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| ||| || | |||||| | || || || | || | ||| Sbjct 143742 CTGGATCTTGGACTTGACATTGTCGATAGTATCAGATGACTCGACCTCAAGGGTGATGGT 143683 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||||| | || || ||||| |||||||| Sbjct 143682 CTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 143650 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| || || | ||||| |||||||| |||||||| || | || |||||| | || Sbjct 144144 AAGCACAAGGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 144085 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||||||||||| || || | || || ||||||||||| |||||||| ||||| || || Sbjct 144084 CTCAAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCAGGAGGAATACCTTCCTTGTC 144025 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| || || | |||||| | || || || | || | ||| Sbjct 144024 CTGGATCTTAGACTTGACGTTGTCGATAGTATCAGATGACTCGACCTCAAGGGTAATGGT 143965 Query 64411 CTTGCCGGTCAAAGTTTTTACGA 64433 |||||| || | || || |||| Sbjct 143964 CTTGCCAGTAAGGGTCTTGACGA 143942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499638798016840