Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq19 219 4e-52 >seq19 Length=300009 Score = 219 bits (242), Expect = 4e-52 Identities = 495/737 (67%), Gaps = 8/737 (1%) Strand=Plus/Plus Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955 |||| || || |||||||| || ||||| ||| ||| |||| || || ||||| || Sbjct 118680 CCCCCACACTTTTCAACGCCGGTACCCCTCAGCCTCAGCTGTCCTCATGCTTCCT--TGT 118737 Query 93956 CGAAC--AAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 ||| |||| ||| ||| ||| || | ||||| ||||||| ||||| | || Sbjct 118738 CGATATGAAGGAGGACAGCATTGACGGTATCTACGACACCCTCAAGACTTGTGCCATGAT 118797 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 || || || || || || || | | || ||| | ||||||| || || || Sbjct 118798 TTCCAAGATGGCTGGTGGTATTGGCTTAAACGTTCACCGAATCCGTGCCACTGGCTCTTA 118857 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 ||| ||||||||| || || ||||||||| | || || ||||| || || |||||||| Sbjct 118858 CATTGCCGGTACCAACGGTACTTCCAACGGCGTGGTTCCCATGCTGCGTGTATTCAACAA 118917 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | | || || || || ||||||||||| | | | ||| | ||||| |||| || Sbjct 118918 CACTGCTCGTTATGTCGACCAGGGTGGCAACAAGCGACCTGGTGCATTCGCTATCTACCT 118977 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 |||||||||||||| ||||| | ||| | || || |||||||||||||| || || Sbjct 118978 TGAGCCCTGGCACGCCGACGTCTTTGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGA 119037 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 || | || | ||||| ||| ||||||||| | || || ||||||||||| || Sbjct 119038 GGAGGTCCGAGCTCGTGACCTGTTCCTGGCTCTCTGGATCCCTGATCTTTTTATGAAGCG 119097 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373 |||||||| ||| || |||| |||| | || ||||| || || || || || |||| Sbjct 119098 TGTCGAGAAGAACGGCGAATGGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTCGCCGA 119157 Query 94374 CGTTTGTGGATCGCG-TTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCA 94432 | || || | || ||||| | |||| | ||||| |||| |||| Sbjct 119158 CTGTTACGG-TGACGAGTTTGAGGCTCTGTACGAGAAGTACGAGAGAGAGGGTAAGGGTC 119216 Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492 | ||| ||| | ||| |||||| ||| | || | || | ||| ||||| | Sbjct 119217 GCAAGTCTATCAAGGCTCAGAAGCTTTGGTACGCCATTCTCGAGGCCCAGACAGAGACCG 119276 Query 94493 GTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTC 94551 | | |||| ||| | | |||||| | ||| |||| |||| |||||| || |||| Sbjct 119277 GAAACCCCTTCATGCTCTACAAGGATCACTG-CAACCGCAAGAGCAACCAAAAGAACCTT 119335 Query 94552 GGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAG 94611 || ||| ||||| || |||||||| ||||| | ||||| | | || || ||| Sbjct 119336 GGTACCATCCGAAGCTCCAACCTGTGCACTGAGATCATTGAGTACTGTGCCCCTGATGAG 119395 Query 94612 ATTGCTGTGTGTAACCT 94628 | ||||| || || || Sbjct 119396 GTCGCTGTTTGCAATCT 119412 Score = 134 bits (148), Expect = 1e-26 Identities = 262/384 (68%), Gaps = 10/384 (3%) Strand=Plus/Plus Query 94994 AGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAG 95053 |||| ||| | ||||| ||| | ||| ||| |||||||| | || | |||||||| Sbjct 119766 AGGGTATTCTCCAGTTTGACATGTGGAATGTCAAGCCCTCTGACCTTTGGGACTGGGAGT 119825 Query 95054 CTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGC 95113 | ||||| | ||||| | | |||||| | ||| || || || || || |||| Sbjct 119826 CCCTACGGGAGGATGTAAAGACGCACGGTATCCGTAACAGTCTACTCGTTGCTCCTATGC 119885 Query 95114 CCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCA 95173 | || ||| |||| ||||||| |||||||||||||||| ||||| |||| |||||||| Sbjct 119886 CTACTGCCAGCACGTCGCAGATTCTTGGCAACAACGAGTGCTTCGAGCCCTACACCTCCA 119945 Query 95174 ACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCT-A 95232 | | ||| | | || || || || || ||||||| || ||||| || || | Sbjct 119946 ATATCTACCAACGCCGAGTCCTTGCTGGCGAATTCCAGGTTGTCAACCCCTGGCTTCTGA 120005 Query 95233 CGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACC----AACTGCTACG 95288 || | || || || |||| | ||| || | ||||||| | |||| Sbjct 120006 AGGATCTTGTCGACT-TGGGCCTTTGGTCCGATGCTATGAAGAACCGTATCATTGCT--- 120061 Query 95289 CGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAA 95348 | ||||| || |||||||||||||| | || || | || ||||||| || ||||| Sbjct 120062 -GATAACGGTTCTGTCCAGAACATCCCCAACATCCCTGCCGATGTCAAGGCTCTGTACAA 120120 Query 95349 GACCGTGTGGGAGATCCCGCAGCG 95372 ||| |||||||| || | ||||| Sbjct 120121 GACTGTGTGGGAAATTTCTCAGCG 120144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494717257137560