Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24]
961 sequences; 37,784,234 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq126 118 1e-21
seq17 105 7e-18
>seq126
Length=117423
Score = 118 bits (130), Expect = 1e-21
Identities = 143/195 (73%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||||||| || || |||||||| || ||||| | |
Sbjct 31046 GACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCA 30987
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| || ||||| |||||||| || || || || ||||| ||| || || |
Sbjct 30986 AAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACG 30927
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||||| ||||||||||| | || | ||| || || || || || ||
Sbjct 30926 TTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTG 30867
Query 138601 ACAAAAATCTGCATG 138615
|| ||||||||||||
Sbjct 30866 ACGAAAATCTGCATG 30852
>seq17
Length=315547
Score = 105 bits (116), Expect = 7e-18
Identities = 264/400 (66%), Gaps = 17/400 (4%)
Strand=Plus/Minus
Query 52445 CTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAA 52504
||||||| ||||||| | | || | | ||| | ||||| || ||||| ||| |||
Sbjct 169304 CTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCCAA 169245
Query 52505 CGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTG---CCTCTACT---A 52558
|||| | || || || || || || || ||||| || ||||| || |||| ||| |
Sbjct 169244 CGAGCTCATCTCCCGTGATGAGGGTCTTCACACCGATTTTGCCTGTCTCCTCCACTCTCA 169185
Query 52559 CAAGACGCG-CGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGG 52617
| | | | |||| | | || | | | ||||| | ||| ||| || |
Sbjct 169184 CCTTAAGGGACGTGCCAGCAA----------GCAGATGATCCAGGACATCATCACCGATG 169135
Query 52618 CGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGA 52677
| || | ||||| ||||||| |||| | || || || | || || |||||||
Sbjct 169134 CCGTTACCATCGAGCAGGAGTTCCTTACCGAGGCTCTCCCTTGTGGTCTTCTAGGCATGA 169075
Query 52678 ACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCG 52737
|| | | |||| ||||||||||||| ||||| ||||||||| | || ||||
Sbjct 169074 ACTCCAACCTCATGAAGCAGTACATCGAGTTCGTGGCTGATCGTCTGCTCGTTGCTCTCG 169015
Query 52738 GGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTG 52797
| | ||| | ||| || || || || || || ||| | ||||| || ||||
Sbjct 169014 GTAATGAGAAGGTGTACAAGGCCACAAACCCCTTCGACTTCATGGAGAACATCTCTCTTG 168955
Query 52798 AGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
|||||||||||||||||||||||||| || | ||| ||
Sbjct 168954 GTGGCAAGACCAACTTTTTCGAGAAGCGCGTTGCCGACTA 168915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496256438647920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |