Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq126 93.3 4e-14 seq81 86.0 6e-12 >seq126 Length=117423 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | | || || || || || || ||||| ||||| || || ||||| Sbjct 31079 CCACCACGGAGGCGGAGGACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 31020 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| ||| || | || || || || | || | ||| ||||||||||| ||| Sbjct 31019 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGA 30960 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 ||||| || || || || || || |||| || | || | ||||||||||||||| || Sbjct 30959 ATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCAATGGTGTCGGAAGACTCCAC 30901 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || | ||| || || || || || || || ||||| ||||| Sbjct 30900 CTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 30853 >seq81 Length=153540 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| || || || || || || |||||||| || || || || ||| | || || Sbjct 143859 CACAAGGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCAGAGAGGGTACGACCGTCCTC 143800 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 | || || || ||| | |||||||| |||||||| || ||||||||||| || || || Sbjct 143799 GAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTG 143740 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || |||| || | || || || |||||||| || || || | || || Sbjct 143739 GATCTTGGACTTGACATTGTCGATAGTATCAGATGACTCGACCTCAAGGGTGATGGTCTT 143680 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| || || || || || |||||||| Sbjct 143679 GCCGGTGAGGGTCTTGACGAAGATTTGCAT 143650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451997770311560