Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq17 134 2e-26 >seq17 Length=315547 Score = 134 bits (148), Expect = 2e-26 Identities = 528/816 (65%), Gaps = 21/816 (3%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| | || ||||||||||| ||||| ||||| ||| | || ||| |||||||| Sbjct 168914 GTAGTCGGCAACGCGCTTCTCGAAAAAGTTGGTCTTGCCACCAAGAGAGATGTTCTCCAT 168973 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 127348 || || || ||||| | | || | | || | ||| | | ||| ||| Sbjct 168974 GAAGTCGAAGGGGTTTGTGGCCTTGTACACCTTCTCATTACCGAGAGCAAC--GAGCAGA 169031 Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408 ||||| | ||| |||| ||||||| ||| | |||||||| || | || | Sbjct 169032 CGATCAGCCACGAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCTAGAAGACCA 169091 Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468 || ||||| || || | |||| ||| ||| ||| || || || | |||| | Sbjct 169092 CAAGGGAGAGCCTCGGTAAGGAACTCCTGCTCGATGGTAACGGCATCGGTGATGATGTCC 169151 Query 127469 TGAATAGTGTCCACCC---CAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAG-CAAA 127524 || || | | | | || ||| || | || | || ||| |||| |||| Sbjct 169152 TGGATCATCTGCTTGCTGGCACGTCCCTTAAGGTGAGAGTGGAGGAG----ACAGGCAAA 169207 Query 127525 CTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCAT 127584 || ||| |||||||| |||||||||||||| || || |||||| |||||| ||||| Sbjct 169208 ATCGGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCAT 169267 Query 127585 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTC 127644 ||| || |||||||| | |||||| || | ||| | || ||||||||| ||||| Sbjct 169268 GAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTC 169327 Query 127645 CACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAACCACT 127703 ||| || || |||| ||||| | ||||| ||| | | | |||| | | ||| Sbjct 169328 AACAGCAGCAAAGGCAACAAGACGTTGAGCAAATGAG-GAGTCCTTGTCCTGGATCCATC 169386 Query 127704 TCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTT 127763 || ||||| | ||||| || ||| || || | || | | || | ||||| | Sbjct 169387 GAATGGCCCAGTCAGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGTTGAAGAGGT 169446 Query 127764 CCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGT 127823 | ||| | || || |||||||| |||| ||||| || ||||| || || Sbjct 169447 ATGTTCTTTGGGCAGGCTCCTTGATGTAGGTATCAATGAGCAGGGAGTATGTCTCAGAGT 169506 Query 127824 GGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACC 127882 ||| | | ||| || | ||| | ||||||| | || || ||| ||||| ||| Sbjct 169507 GGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGATCTGGACC 169565 Query 127883 TCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAA 127941 || | || ||| | | | | ||||| || || |||||||| |||| || || Sbjct 169566 TC-GCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATACCATCGGAGGCAGCGAAGAA 169624 Query 127942 CGCCAGGATATACTTTATGAATTTCTGTTCAT-TCTCGTTCA--GGGTCTTCCAGTCGTC 127998 || || || | ||||| ||| |||| | | || | || | |||||||||| Sbjct 169625 AGCAAGAATGTGGGAGATGAAGAACTGCTCATCTGTAGTCAAACGGTTGTTCCAGTCGTG 169684 Query 127999 GAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||||||||| || ||||| | |||||| || ||||| Sbjct 169685 GAGATCCTTGGAAAGATCAATCTCCTCGGCTGTCCA 169720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613499830244760