Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq151 134 1e-25 seq96 93.3 3e-13 seq44 86.0 5e-11 >seq151 Length=91040 Score = 134 bits (148), Expect = 1e-25 Identities = 696/1100 (63%), Gaps = 13/1100 (1%) Strand=Plus/Minus Query 517213 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 517272 ||| ||||| ||| || ||||| ||| || || || |||| | || || | Sbjct 42509 ATTGGTAATGACAATCTTGTTGGACTTGCCGGTACCCTTCTCGACGGCGGAGACGTTCAT 42450 Query 517273 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 517332 ||||| |||||||| | ||| || ||||| ||||| || || || || | ||||||| Sbjct 42449 GATACCGTTGGCATCAAGATCGAAGGTGACCTCAATCTGGGGAACACCACGGGGAGCAGG 42390 Query 517333 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 517392 ||||| || | | || | |||| | ||||| || || ||| | || || Sbjct 42389 GGGGATACCAGTGAGCTCGAACTTGCCCATAAGGTTATTGTCCTTGGTGCGCTGGCGCTC 42330 Query 517393 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 517452 ||||||| | | |||||| || ||| || ||||| || | || | || || Sbjct 42329 ACCCTCGTAGACCTGGATAAGGACACCAGGCTGGTTATCGGAGAAGGTAGAGAAGACCTC 42270 Query 517453 GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGC 517512 ||| || || ||||| || ||||| | |||| |||||||| |||||||| || Sbjct 42269 GGACTTCTTGGTGGGAATAGTGGTGTTGCGGGGGATAAGCTTGGTCATCATACCACCAGC 42210 Query 517513 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 517570 || || | ||| ||||| ||||| | || || | |||| ||| | || | | || Sbjct 42209 GGTCTCAATACCGAGAGAGAGAGGGGCAACGTCGAGAAGGAGAATCTCGTTGGTGGCCTT 42150 Query 517571 TCATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 517629 | || | | |||| |||||||| || || | ||| ||||| || |||||||| || Sbjct 42149 GCTGGAGGTGTCACCAGAGAGAATAGCAGCCTGGACAGCGGCACCGTAGGCAACAGCCTC 42090 Query 517630 ATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT 517689 ||| || || | | | || | | || || ||||| | | | | || | ||| Sbjct 42089 ATCGGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTGAAGTAGTCGGTGATGAGCT-TCT 42031 Query 517690 T-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTAT 517748 || || ||||| | ||||| || || | || || || || || | || || | Sbjct 42030 GGACACGGGGGATACGGGTAGATCCACCGACGAGGACGATCTCGTGGACAAGGGACTTGT 41971 Query 517749 CCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTG 517808 | | || | || | || || ||||| | | | | || || | || Sbjct 41970 CGATCTTGGCGTCAGTGAGGACACGGTCGACGGGCTGGATAGTAGATCGGAAGAGATCCT 41911 Query 517809 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAA 517866 || || || ||||| ||| | || || || | || || ||||| || ||||| Sbjct 41910 GGCAGAGCTCCTCGAAACGAGCACGGGT--GATGGAGGTGTAGAAGTCAATACCCTCGAA 41853 Query 517867 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 517926 | ||| || | || || | || |||| |||||||| || | || || ||||| || Sbjct 41852 AAGAGAGTCGATCTCGATGGAGGTCTGAGCGGAAGAAGAGAGAGTTCGCTTGGCACGCTC 41793 Query 517927 ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTC--AAATCTGTTTTATAT 517984 ||| || || | || | ||| | || | |||| | | || || |||||| Sbjct 41792 ACAAGCGGTTCGAAGGCGTCGGAGAGCACGAAC--ATTGGTGCCCAAGTCCTTTTTATGC 41735 Query 517985 TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCC 518044 |||| |||||| || | ||| | | || ||||| ||||| ||||||||||| ||| Sbjct 41734 TTTCGCTTGAACTCGTTAACGAAGTGGTTGACCAGACGGTTATCGAAATCTTCACCACCC 41675 Query 518045 AATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGA 518104 || | ||| | || | |||| | || | ||| | || || |||| | | ||| Sbjct 41674 AAGTGAGTGTCACCGGCGGTAGACTTGACCTCGAAGATACCCTCCTCAATGGTGAGGAGA 41615 Query 518105 GTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG 518164 | ||||| || |||||||| | ||| || ||||| || || || || Sbjct 41614 GAGACATCGAAAGTACCACCACCAAGATCGAAGATAAGGACGTTGCGCTCGCCCTCAACC 41555 Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 || || || ||||| || |||| |||||||| || || || || || |||| | ||| Sbjct 41554 TTCTTGTCGAGACCGTAGGCAATGGCAGCAGCGGTAGGCTCGTTGATGATTCGGAGAACG 41495 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 || || || ||||| || || || || || || || | || || ||||| || || Sbjct 41494 TTGAGGCCGGCAATGAGACCAGCGTCCTTGGTAGCCTGGCGCTGAGAGTCGTTGAAGTAG 41435 Query 518285 GCAGGAACAGTAATAACGGC 518304 || || ||||| | |||||| Sbjct 41434 GCGGGGACAGTGACAACGGC 41415 >seq96 Length=142780 Score = 93.3 bits (102), Expect = 3e-13 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914 ||||| ||||| ||| | |||| || |||||||| || ||||||||| | ||||||||| Sbjct 55366 GGTAAGGAAGGCCGTCTCCGAGGTAACTTGATGGGTAAGCGTGTCGATTTCTCTGCACGT 55425 Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTATT 668974 || || |||||| |||| |||| | ||||| | || || ||||| |||| | ||| Sbjct 55426 ACTGTCATTACTGGTGATGCCAACCTCTCTCTCCACGAGGTCGGTGTGCCTCGCAGCATT 55485 Query 668975 GCTAAAAATCTTACTT 668990 || | | ||| |||| Sbjct 55486 GCCAGGACTCTCACTT 55501 >seq44 Length=225476 Score = 86.0 bits (94), Expect = 5e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 366988 AAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTT 367047 ||| |||| || || ||||| || || || ||||| ||| | ||||||||||| ||| || Sbjct 197220 AAAGTTGTTGTTGCAACAATTGCTTTCGGGATGGGAATTGACAAACCGGATGTGAGATTT 197161 Query 367048 GTTATTCATTATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCA 367107 || || ||| ||||| ||||||| | | |||||||| || || || | ||| | || Sbjct 197160 GTCATACATCATGGACTCCCCAAGAGTTTGGAAGGTTACTACCAGGAGACGGGTCGTGCT 197101 Query 367108 GGTCGTGATGGA 367119 || | |||||| Sbjct 197100 GGAAGAGATGGA 197089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780774712014466