Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq151 343 2e-89 seq79 89.7 7e-13 seq101 82.4 1e-10 >seq151 Length=91040 Score = 343 bits (380), Expect = 2e-89 Identities = 993/1528 (65%), Gaps = 25/1528 (2%) Strand=Plus/Minus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 || || || || || ||||| || ||||| | || ||| ||||| || || || || Sbjct 42583 TCGTCCTCCTCCTTGTACTTCTCGGCATCGTTGAGCATGCGCTCAATCTCCTCCTTGGAC 42524 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| ||||| ||||| |||||| | ||| || || | |||| || | Sbjct 42523 AGGCGGCCCTTGTCATTGGTAATGACAATCTTGTTGGACTTGCCGGTACCCTTCTCGACG 42464 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || || |||| ||||| || ||||||| |||||| | || | ||| || || | Sbjct 42463 GCGGAGACGTTCATGATACCGTTGGCATCAAGATCGAAGGTGACCTCAATCTGGGGAACA 42404 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || || | || ||||| || | || || | || | | | || ||| | Sbjct 42403 CCACGGGGAGCAGGGGGGATACCAGTGAGCTCGAACTTGCCCATAAGGTTATTGTCCTTG 42344 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | || || ||||| || ||||| | || || |||| || ||||| Sbjct 42343 GTGCGCTGGCGCTCACCCTCGTAGACCTGGATAAGGACACCAGGCTGGTTATCGGAGAAG 42284 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || ||||||| | ||||| | ||||| || || || | || |||| | |||| Sbjct 42283 GTAGAGAAGACCTCGGACTTCTTGGTGGGAATAGTGGTGTTGCGGGGGATAAGCTTGGTC 42224 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || |||||||| || || | || ||||| ||||| | ||||| | || | | Sbjct 42223 ATCATACCACCAGCGGTCTCAATACCGAGAGAGAGAGGGGCAACGTCGAGAAGGAGAA-- 42166 Query 6989 TCTTGAACAGATTCGTTCCCTT-----------CACCCGTTAAGATGGCGGCTTGGACCG 7037 ||| | || || |||| |||| | | || || || ||||| | Sbjct 42165 TCTCG------TTGGTGGCCTTGCTGGAGGTGTCACCAGAGAGAATAGCAGCCTGGACAG 42112 Query 7038 TCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAA 7097 || ||||| || || |||||||||||||| || | || || | || || ||||| | Sbjct 42111 CGGCACCGTAGGCAACAGCCTCATCGGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTGA 42052 Query 7098 AATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGA 7157 | || || | | | | || | ||||| || || ||||||||||| | |||| Sbjct 42051 AGTAGTCGGTGATGAGCTTCTGGACACGGGGGATACGGGTAGATCCACCGACGAGGACGA 41992 Query 7158 TTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA 7217 | || | || || || |||||||| | ||| || ||||| || | | Sbjct 41991 TCTCGTGGACAAGGGACTTGTCGATCTTGGCGTCAGTGAGGACACGGTCGACGGGCTGGA 41932 Query 7218 TACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTAT 7277 || ||||| | ||| || || ||||| ||||| |||||||| ||||| || | Sbjct 41931 TAGTAGATCGGAAGAGATCCTGGCAGAGCTCCTCGAAACGAGCACGGGTGATGGAGGTGT 41872 Query 7278 AGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATA 7337 |||| |||| || ||| | | || || || || |||| || || || | ||||| | Sbjct 41871 AGAAGTCAATACCCTCGAAAAGAGAGTCGATCTCGATGGAGGTCTGAGCGGAAGAAGAGA 41812 Query 7338 ACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGG 7397 |||||||| || |||||||| || ||||| | || || || ||||| || | Sbjct 41811 GAGTTCGCTTGGCACGCTCACAAGCGGTTCGAAGGCGTCGGAGAGCACGAACATTGGTGC 41752 Query 7398 AAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAAT 7457 | || || ||||| || || || ||||| | | |||||| | || | || Sbjct 41751 CCAAGTCCTTTTTATGCTTTCGCTTGAACTCGTTAACGAAGTGGTTGACCAGACGGTTAT 41692 Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517 |||||||||||||||||||||| || || || ||||| | ||||| || |||||||| Sbjct 41691 CGAAATCTTCACCACCCAAGTGAGTGTCACCGGCGGTAGACTTGACCTCGAAGATACCCT 41632 Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577 | |||||| | | | || ||||| || ||||||||||| || || || || || |||| Sbjct 41631 CCTCAATGGTGAGGAGAGAGACATCGAAAGTACCACCACCAAGATCGAAGATAAGGACGT 41572 Query 7578 TCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637 | ||| | || ||||| ||||||||||| || || || || || || || || | Sbjct 41571 TGCGCTCGCCCTCAACCTTCTTGTCGAGACCGTAGGCAATGGCAGCAGCGGTAGGCTCGT 41512 Query 7638 TAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697 | || || || ||| ||| ||||| ||||| | || || || || || || || | Sbjct 41511 TGATGATTCGGAGAACGTTGAGGCCGGCAATGAGACCAGCGTCCTTGGTAGCCTGGCGCT 41452 Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGAT 7757 | || ||||| |||||||| ||||| || || || |||| |||| ||| ||| || | Sbjct 41451 GAGAGTCGTTGAAGTAGGCGGGGACAGTGACAACGGCGTTGTTGACAGTCTCACCAAGGT 41392 Query 7758 ACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAA 7817 | || || || | || ||| ||||| || | ||| | || ||||| |||| | | Sbjct 41391 AAGACTCAGCAGTCTCACGCATCTTGGTGAGGATCATGGCGGAGATCTCCTCAGGGGTGA 41332 Query 7818 ACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGA 7877 | ||| | ||||| || || ||||| || || | ||| || |||| | || Sbjct 41331 AGGTCTTCTTCTCACCCTTGAACTCAACCTCGATGACGGGCTT---GCCAGCCTTGTCGA 41275 Query 7878 TAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTC 7937 || | | | | | ||||| ||| | ||||||| || | ||||| | | Sbjct 41274 CAATTGTGAAAGGGAAGTGCTTCATGTCGGCCTGGACCTCAGCATCGGCGAACTTGCGAC 41215 Query 7938 CGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCG 7997 |||| | ||||| || || || || ||||| | |||||||||||| |||||||| | Sbjct 41214 CGATCAATCGCTTGGCGTCGAAGACGGTGTTCTGGGGGTTCATGGCGACCTGGTTCTTGG 41155 Query 7998 CCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTC 8057 | || || ||||| ||||| || | || || || ||||| | || ||||| |||| Sbjct 41154 CGGCATCACCGATCAGACGCTC---GGTGTCGGTGAAACCGACGAATGAGGGGGTAGTTC 41098 Query 8058 GATTCCCTTGGTCGTTCGCAATAATTTC 8085 | || || |||||||| || || || || Sbjct 41097 GGTTACCCTGGTCGTTGGCGATGATATC 41070 >seq79 Length=157024 Score = 89.7 bits (98), Expect = 7e-13 Identities = 139/197 (71%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656 ||| ||||||||||| || | ||| || || || || || || | | ||| || ||| Sbjct 71647 CTTCTCGAGACCGTAGGCAAGAGCGGCGGCAGTAGGCTCGTTGACGACACGGAGGACGTT 71588 Query 7657 CAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 ||||| ||||| ||| | ||||| || || |||||||| || ||||| |||||| Sbjct 71587 GAGGCCGGCAAT--TTGACCAGCATCCTTGGTACTCTGTCGTTGAGAGTCGTTGAAGTAG 71530 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774 || ||||| || ||||| |||| | ||| |||| ||| || | || ||| | || Sbjct 71529 GCGGGGACGGTGACGACGGCGTTCTTGATGGGCTTAGAGAGGTAAGCCTCGGCGGTCTCC 71470 Query 7775 TTCATTTTGGTAAGAAC 7791 ||||| ||| | || || Sbjct 71469 TTCATCTTGTTGAGGAC 71453 >seq101 Length=139057 Score = 82.4 bits (90), Expect = 1e-10 Identities = 166/243 (68%), Gaps = 5/243 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||| | ||| || || || ||||| || || || |||||||| Sbjct 100513 TCGAAATCCTCACCACCAAGGTGAGTGTCACCAGCGGTAGCAAGAACCTCGAAGATACCG 100572 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | || ||||| || ||||||||||| || || | || | | Sbjct 100573 TCGTCAATGGAGAGGAGAGAGACATCGAAAGTACCACCACCAAGATCGTA---GACAATG 100629 Query 7577 TTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || | || || | | |||||| || |||||||| |||||||| || || || || || Sbjct 100630 ATC-TGGCGCTCACCGTCGTTCTTGTCAAGACCGTAGGCGATAGCGGCGGCGGTGGGCTC 100688 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || | ||| || || ||| || || || ||| | || || || || || ||||| Sbjct 100689 GTTGACAATTCGGAGGACGTTGAGACCGGCGATAACACCGGCGTCCTTGGTGGCCTGTCG 100748 Query 7696 TTG 7698 || Sbjct 100749 CTG 100751 Score = 82.4 bits (90), Expect = 1e-10 Identities = 96/130 (74%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763 |||| |||||||| ||||| || ||||| |||| ||||| ||||||||||| || | Sbjct 100812 CGTTGAAGTAGGCGGGGACGGTAACGACGGCGTGGGTGACCTTCTTACCGAGGTAGCCCT 100871 Query 7764 CCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTT 7823 | |||| || ||||| || |||||||| | |||||||| |||| | ||||| | Sbjct 100872 CGGCGACCTCCTTCATCTTTCCGAGAACCATAGCAGAAATCTCCTCAGGAGTGAACTGCT 100931 Query 7824 TCGTTTCACC 7833 || | |||| Sbjct 100932 TCTTGGCACC 100941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635125170467240