Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq19 181 1e-40 seq17 122 1e-22 seq15 109 7e-19 seq156 93.3 5e-14 >seq19 Length=300009 Score = 181 bits (200), Expect = 1e-40 Identities = 529/806 (66%), Gaps = 19/806 (2%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| | ||||| || || | || ||| || || ||||| || ||| Sbjct 118574 CCTCAGCACATGATTATGCGTGTTGCTGTTGGCATCTGGGGTGATGATATCGAGCGTGTC 118633 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 |||||||||||| || |||||| | | |||| || || | || || || ||| Sbjct 118634 TTGGAGACATACAACCTCATGTCCAGCAAGTTCTTCACTCATGCTTCCCCCACACTTTTC 118693 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 ||||| ||||| || || || ||||| || |||||| | | | |||||||| Sbjct 118694 AACGCCGGTACCCCTCAGCCTCAGCTGTCCTCATGCTTCCTTGTCGATATGAAGGAGGAC 118753 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 || | || || |||| ||| |||| |||||| || || ||| ||||||| Sbjct 118754 AGCATTGACGGTATCTACGACACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCTGGT 118813 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAAT 111911 ||||| || | || | || || | |||| ||| ||| ||||| || Sbjct 118814 GGTATTGGCTTAAACGTTCACCGAATCCGTGCCACTGGCTCTTACATTGCCGGTACCAAC 118873 Query 111912 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 111971 ||| || | || | |||| ||||| || ||||| ||| ||| || || ||||| Sbjct 118874 GGTACTTCCAACGGCGTGGTTCCCATGCTGCGTGTATTCAACAACACTGCTCGTTATGTC 118933 Query 111972 AACCAAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGGCAC 112025 |||| | ||| |||| || || |||| |||| |||||||| |||||| Sbjct 118934 GACCAGGGTGGCAA---CAAGCGACCTGGTGCATTCGCTATCTACCTTGAGCCCTGGCAC 118990 Query 112026 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC 112085 || || || | ||||||||||| | || ||||| ||| | ||||||| || Sbjct 118991 GCCGACGTCTTTGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGAGCT 119050 Query 112086 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 112145 || || || ||| ||||||||||| || ||||| || |||||| | || ||| ||| Sbjct 119051 CGTGACCTGTTCCTGGCTCTCTGGATCCCTGATCTTTTTATGAAGCGTGTCGAGAAGAAC 119110 Query 112146 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGT--GGGTG 112203 ||| | ||| |||| | || || || || || |||||| |||| | || |||| Sbjct 119111 GGCGAATGGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTCGCCGA--CTGTTACGGTG 119168 Query 112204 AGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGC 112263 | |||||||| || || ||| ||||||||| ||| || || | | || | | Sbjct 119169 ACGAGTTTGAGGCTCTGTACGAGAAGTACGAGAGAGAGGGTAAGG-GTC-GCAAGTCTAT 119226 Query 112264 CA--GCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320 || ||| | || | | ||| | || |||||| || | || || ||||| || | || | Sbjct 119227 CAAGGCT-CAGAAGCTTTGGTACGCCATTCTCGAGGCCCAGACAGAGACCGGAAACCCCT 119285 Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380 ||||| ||||| || ||| |||| ||||| || |||||||| | ||| ||| Sbjct 119286 TCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGTACCATCC 119345 Query 112381 AGAGTTCCAACCTCTGTACAGAAATC 112406 || |||||||| || || || ||| Sbjct 119346 GAAGCTCCAACCTGTGCACTGAGATC 119371 >seq17 Length=315547 Score = 122 bits (134), Expect = 1e-22 Identities = 161/221 (73%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 102112 TTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCGT 102170 |||| || || | |||||| || || ||||| || ||| | | |||| | | | | Sbjct 169422 TTCCTTGCATCCGAAAGAAGGCTGACTGGGCCATTCGATGGATCCAGGACAAGGACTCCT 169363 Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 | |||||| | || || | || ||||| ||||||||||||||||||| ||| || Sbjct 169362 -CATTTGCTCAACGTCTTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCC 169304 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 || | | || | |||||||||||||| || |||||||| ||||| |||||||||| Sbjct 169303 TTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCCAAC 169244 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||| ||||| ||||| ||||| || ||| || ||||| Sbjct 169243 GAGCTCATCTCCCGTGATGAGGGTCTTCACACCGATTTTGC 169203 >seq15 Length=326598 Score = 109 bits (120), Expect = 7e-19 Identities = 184/261 (70%), Gaps = 9/261 (3%) Strand=Plus/Plus Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 16124 || |||||||| || ||||||| ||| || || ||| | |||| | | | || ||| Sbjct 156854 GCGTCAATCTCGTCGATGAAGATGATACAAGGAGCATTCTTGCGACCTTCGGCGAACAGA 156913 Query 16125 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAACA 16183 || ||||||||| | || ||||||||||||||||| || || | | || ||| Sbjct 156914 TCTCGTACACGCGAAGGTCCGACACCAACAAACATCTCAACGAATTCGGAACCGCTCACA 156973 Query 16184 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 16243 | || |||||| || ||| ||||| || |||| ||| || | |||||||| || Sbjct 156974 CT-GAAGAAGGGCACTCCAGACTCACCAGCCGTGGCCTTGGCAAGCAACGTCTTACCAGT 157032 Query 16244 ACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC---ACTTCCAAAGTA 16300 ||| || || || | || |||||||||||| ||||||||||| || |||| | Sbjct 157033 ACCGGGGGGTCCAGCCAAGATGGCACCTCGTGGGATCTTGGCGCCTAGCTTTTCAAACT- 157091 Query 16301 TCTCTCAGGTTGCTT-AAGAA 16320 ||||||| ||||| ||||| Sbjct 157092 --TCTCAGGCTGCTTCAAGAA 157110 >seq156 Length=87667 Score = 93.3 bits (102), Expect = 5e-14 Identities = 167/236 (71%), Gaps = 10/236 (4%) Strand=Plus/Minus Query 16058 TCCCACGGCATCAATCTCATCAATGAAGACGATG-CATGG---TTGATTTTCGCGAGCGA 16113 ||| | ||| || | ||||| || ||||| ||| || || ||| |||| ||| || | Sbjct 16074 TCCAATGGCGTCGAGTTCATCGATAAAGACAATGGCAGGGGACTTGTTTTTGGCG-GC-A 16017 Query 16114 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 16173 | ||||| || || || |||||||| || ||||||||||| ||||| |||| | | Sbjct 16016 GTG--AAGAGCTCGCGGACTCGCTTGGCACCAACACCAACAAAGATCTCGTCAAA-CTCG 15960 Query 16174 CGGCGGAACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 16232 | | |||| | || ||| || ||| | |||||| |||| |||||| || ||||| Sbjct 15959 CTACCAGACATGTAGAAGAAAGGAACACCGGCTTCACCGGCAACGGCTCGAGCAAGAAGC 15900 Query 16233 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 |||||||| ||||| || ||| | |||||| | || |||| |||||| || Sbjct 15899 GTCTTACCAGTACCGGGGGGACCAACCAGGAGGACGCCCTTGGGAAGCTTGGCACC 15844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620734943331920