Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq19 239 5e-58 seq15 131 2e-25 >seq19 Length=300009 Score = 239 bits (264), Expect = 5e-58 Identities = 1019/1589 (64%), Gaps = 51/1589 (3%) Strand=Plus/Minus Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGG 109566 |||||||||||||| ||||| |||||| || || ||||| | | | | | | | Sbjct 120198 GACTGAGACTGATCAATGAAGGCACCACGGTCCGCAGCCATTTGCACAA----CCTGTCG 120143 Query 109567 CT----AATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGAT 109622 || ||||||||| ||||||||||||| | ||||| ||| | || |||| ||| Sbjct 120142 CTGAGAAATTTCCCACACAGTCTTGTACAGAGCCTTGACATCGGCAGGGATGTTGGGGAT 120083 Query 109623 GTTTTGAATAGAGCC---ACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAG 109679 ||| || | ||| || | |||| | | | | | |||||| | | ||||| || Sbjct 120082 GTTCTGGACAGAACCGTTATCAGCAATGA---TACGGTTCTTCATAGCATCGGACCAAAG 120026 Query 109680 ACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAG 109739 || | | ||||| | | ||| |||||| || ||||| |||||||| Sbjct 120025 GCCCAAGTCGACAAGATCCTTCAGAAGCCAGGGGTTGACAACCTGGAATTCGCCAGCAAG 119966 Query 109740 TGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGAT 109799 || || ||||||| || | |||||||| ||||| ||||| |||||||| || || Sbjct 119965 GACTCGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCAAGAAT 119906 Query 109800 TTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGT 109859 || | ||| || || ||||| ||||| | ||| |||||||| |||| ||| | ||| Sbjct 119905 CTGCGACGTGCTGGCAGTAGGCATAGGAGCAACGAGTAGACTGTTACGGATACCGTGCGT 119846 Query 109860 CTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATC 109919 |||||| ||| || | | ||||| || || | || | || ||| Sbjct 119845 CTTTACATCCTCCCGTAGGGACTCCCAGTCCCAAAGGTCAGAG------GGCTTGACATT 119792 Query 109920 CCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGA 109979 |||||| || || || | |||||||| ||| ||||| |||||||| | ||| | Sbjct 119791 CCACATGTCAAACTGGAGAATACCCTCAGAAGCGGGAGAGCCCTTGAAGGTGGAGTAAGG 119732 Query 109980 CCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAA 110039 ||||| ||| ||| | || || | || || || || || || |||||||| Sbjct 119731 GCCCTCCTCCTTGGCGAGCTGCACAGAGGTGGTAAGGGCAGCGTGGTAGATTGTCTCAAA 119672 Query 110040 AATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAA 110099 || || |||| |||| ||| | | |||||||| | | | || || Sbjct 119671 GATTTGCTTGTTCAGCTCACGAGCCTCAGGAGACTCGAAGGGCATGCGAAGTGCAAGGAA 119612 Query 110100 CACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCG 110159 |||| || ||||| ||||| || || |||||||| || || |||||| | || Sbjct 119611 GGCATCAGCAAGACCTTGAACGCCAAGGCCAATGGGTCGGTGACGCATGTTGCTGTTGCG 119552 Query 110160 AGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGT 110219 ||| || || |||||| ||| ||| |||| | ||| || || | || | Sbjct 119551 AGCCTCTTGCACAGGGTAATGGTTTACGTCAATGATCTTATTCAGGTTGCG-GACAACGA 119493 Query 110220 CTTC-GTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCC----TTATTGACA 110274 || || | || ||||| || | | | ||| | | | ||| | ||| ||| | Sbjct 119492 CTCGAGTAACATCGTGGAGCTTCTTGAAGTCGTA-GCAAGCATCTTCATAGTTAATGAAA 119434 Query 110275 TATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTAT 110334 | || |||| | |||||||||||||| |||| ||| || | | ||| Sbjct 119433 GAA---GGCAGAGACAAGGACGCAAGATTGCAAACAGCGACCTCATCAGGGGCACAGTAC 119377 Query 110335 TCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGAT 110394 || | || || || |||| |||||| || ||| ||| | |||||| || || Sbjct 119376 TCAATGATCTCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTC 119317 Query 110395 TTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTG 110454 ||| |||||| |||||| ||||||||| | ||| | || || || ||||| | || | Sbjct 119316 TTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCG 119257 Query 110455 AGAATGGCCTTCCATA-CATCGGCGGC-GGGGACAGTTGCGTTAGCGAGACCTTCCTCCT 110512 |||||||| | ||| | | || | | | | | | ||||| | | ||| || || Sbjct 119256 AGAATGGCGTACCAAAGCTTCTGAGCCTTGATAGACTTGCG--ACCCTTACCCTCTCTCT 119199 Query 110513 CGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACA-TCAGAAAGACCCTTCGCC 110571 ||||||| ||||| ||||||| || | ||||| ||| || | ||||| | Sbjct 119198 CGTACTTCTCGTACAGAGCCTCAAACTCGTCACCGTA-ACAGTCGGCGAGACCAGGGCAC 119140 Query 110572 TTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCA 110631 | || ||| || | || | ||| | || || ||| || | |||||| || || ||| Sbjct 119139 TCGTTGGGGCACATAAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATAAAAAGATCA 119080 Query 110632 GGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGG 110691 || ||||| | ||| ||| |||||||| || |||| || | ||| ||||| Sbjct 119079 GGGATCCAGAGAGCCAGGAACAGGTCACGAGCTCGGACCTCCTCCTTACCGTGGTTCTTT 119020 Query 110692 CGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCG-ATG-- 110748 || || || | || || | || || | |||||| || || || |||| |||| ||| Sbjct 119019 CGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCAAGGTAGATAGCGAATGCA 118960 Query 110749 ---GATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTG 110805 | || ||| | | || |||||| ||||| || || ||| ||||| || | Sbjct 118959 CCAGGTCGCTT--GTTG-CCACCCTGGTCGACATAACGAGCAGTGTTGTTGAATACACGC 118903 Query 110806 AGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCA 110865 ||||| |||| | || | ||| ||| || ||||| ||| || | ||||| Sbjct 118902 AGCATGGGAACCACGCCGTTGGAAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCA 118843 Query 110866 CGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC-ACTC 110924 || || ||| | | | ||||||||||| ||| ||| ||| |||| | || Sbjct 118842 CGGATTCGGTGAACGTTTAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTC 118783 Query 110925 TGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGA 110984 | |||| || | || ||||| ||||| || |||| | | | || ||||| || Sbjct 118782 T-TGAGGGTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATATCGACAAGGAAGCATGA 118724 Query 110985 AGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAG 111044 |||| |||||| |||| || || || ||||| ||||| || | |||||| ||| || Sbjct 118723 GGACAGCTGAGGCTGAGGGGTACCGGCGTTGAAAAGTGTGGGGGAAGCATGAGTGA--AG 118666 Query 111045 ACCTTG--GGACATCTTGTTGTATGTGTC 111071 | |||| |||||| ||||||||| || Sbjct 118665 AACTTGCTGGACATGAGGTTGTATGTCTC 118637 >seq15 Length=326598 Score = 131 bits (144), Expect = 2e-25 Identities = 313/465 (67%), Gaps = 24/465 (5%) Strand=Plus/Plus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 ||||| || || || || || | | || | || || ||||| | ||||| ||| | Sbjct 156668 CGATCAAATCGTCCAGGTCGCATCAAGGCCTTGTCCAGCATATCTGCTCGGTTAGTACCA 156727 Query 11563 GCAATGACTACAATGCCAGTCTCAT---TGTCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619 || | ||| || | || | |||| ||| || ||||||||||| || |||| |||| Sbjct 156728 GCGAGGACAACCA--CCTG-CTCACGGGTGTTAAAGCCGTCCATTTCGGTAAGAATCTGG 156784 Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAACGCTTCTT---- 11675 || | ||| ||||||||| ||||| | ||| | |||| | ||| | Sbjct 156785 TTCAGGGTCGCTTCACGCTCGTCGTTACCACCAAAACC-CTTGCCACTCTCTTGTCGCGC 156843 Query 11676 ---ACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTG 11732 ||||| |||||||||||| |||||||| | |||||| || || || | | Sbjct 156844 GCGACCGATAGCGTCAATCTCGTCGATGAAGATGATACAAGGAGCATTCTTGCGACCTTC 156903 Query 11733 TTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG- 11791 |||| || || ||||||||| | ||| ||||| || |||||||||||||| | | Sbjct 156904 GGCGAACAGATCTCGTACACGCGAAGGTCCGACACCAACAAACATCTCAACGAATTCGGA 156963 Query 11792 -CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGA 11850 | || | ||||||| |||||| || |||||||||||| |||| || || | Sbjct 156964 ACCGCTCA-CACTGAA-GAAGGGCACTCCAGACTCACCAGCCGTGGCCTTGGCAAGCAAC 157021 Query 11851 GTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC---A 11907 |||||||| ||||| || | ||||| | | ||| || || ||||||||||| || Sbjct 157022 GTCTTACCAGTACCGGGGGGTCCAGCCAAGATGGCACCTCGTGGGATCTTGGCGCCTAGC 157081 Query 11908 CTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCC 11952 || |||| | |||||||| ||| | |||| ||| | |||| Sbjct 157082 TTTTCAAACT---TCTCAGGCTGCTTCAAGAAGCTCACGAACTCC 157123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588968924925800