Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq94 118 1e-21 >seq94 Length=145285 Score = 118 bits (130), Expect = 1e-21 Identities = 266/396 (67%), Gaps = 9/396 (2%) Strand=Plus/Plus Query 159386 GAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGG 159445 |||| || || |||| || | || || || || || || ||||| || |||| |||| Sbjct 7452 GAAAGGTCTGCCTGATCCCCGTTTCCGCCCACGGTACCAACCCTGCCTCTGCAGCCATGG 7511 Query 159446 CAGGGATGAAAGTTGTAGGTGTCAAGTGTGATG--ATGA-TGGCAACATAGACATCAAAG 159502 | || ||||| || || |||||||||||| | | || ||| ||| | ||||| | | Sbjct 7512 CTGGTATGAAGGTCGTCACTGTCAAGTGTGACGGCAAGACTGGTAACCTGGACATTGAGG 7571 Query 159503 ATCTAGAG---AAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACAT 159559 |||| || ||| || || | | | ||| || | |||||| | || | Sbjct 7572 ATCTTAAGGCCAAGTGTGC---CAAGCACGCTGATGAGCTTGCTGCCATTATGGTCACCT 7628 Query 159560 ATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATG 159619 |||| || || ||||| || || | | |||| ||| | ||| | ||||||| | Sbjct 7629 ATCCTTCCACCTTCGGTGTTTTCGAGCCTGAGATCAAGCAGGTCTGTGACCTTGTTCACG 7688 Query 159620 AGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAA 159679 || | ||||||| || || | || ||||| || | || || ||| | ||||| Sbjct 7689 AGCACGGTGGTCTTGTCTACATGGACGGTGCCAACATGAACGCCCAGATTGGTCTCTGCT 7748 Query 159680 AACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTC 159739 || ||||| || || ||||| || ||||| ||| | || ||||| |||||||||| Sbjct 7749 CTCCCGGTGACATCGGCGCTGATGTCTGCCATCTTAACCTCCACAAGACCTTCTGTATTC 7808 Query 159740 CACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTG 159775 | || || ||||| || ||||| || |||||||||| Sbjct 7809 CCCACGGTGGTGGTGGCCCTGGTGTCGGTCCTATTG 7844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588044136034960