Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq126 161 2e-34 seq81 156 9e-33 seq82 150 4e-31 >seq126 Length=117423 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||| ||||| || || || ||||| ||| || || | ||||| ||| Sbjct 31061 ACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 31002 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| || ||||||||||| || ||||| || |||||||| || ||||| || Sbjct 31001 AGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 30942 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| ||||||||||| ||| ||||| |||||||| | |||||| Sbjct 30941 ATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 30882 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 30881 CCCGTGAGGGTCTTGACGAAAATCTGCAT 30853 >seq81 Length=153540 Score = 156 bits (172), Expect = 9e-33 Identities = 154/199 (77%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| ||||| ||||||||||| || ||||| |||| || || | ||||| || Sbjct 144140 ACAAGGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCA 144081 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| |||||||||||||| || ||||| |||||||| ||||| ||||| || Sbjct 144080 AGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCAGGAGGAATACCTTCCTTGTCCTGG 144021 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || || || || || || || |||||||||| ||||| Sbjct 144020 ATCTTAGACTTGACGTTGTCGATAGTATCAGATGACTCGACCTCAAGGGTAATGGTCTTG 143961 Query 195112 CCTGTCAAAGTTTTTACGA 195130 || || | || || |||| Sbjct 143960 CCAGTAAGGGTCTTGACGA 143942 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| ||||| ||||||||||| || ||||| || | || || | || || ||| Sbjct 143858 ACAAGGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCAGAGAGGGTACGACCGTCCTCG 143799 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||| || | ||| || ||||| |||||||||||||| ||||| || Sbjct 143798 AGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGG 143739 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || || || || || || || |||||||| | ||||| Sbjct 143738 ATCTTGGACTTGACATTGTCGATAGTATCAGATGACTCGACCTCAAGGGTGATGGTCTTG 143679 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | |||||| Sbjct 143678 CCGGTGAGGGTCTTGACGAAGATTTGCAT 143650 >seq82 Length=153091 Score = 150 bits (166), Expect = 4e-31 Identities = 154/201 (77%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||||||||| ||||| ||||| || || || ||||| |||| || |||| ||||| || Sbjct 10451 AACAAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTC 10392 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || |||||||| | ||| |||||||| || |||||||| || ||||| || Sbjct 10391 GAGCTGCTTGCCAGCGAAGATCAATCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTG 10332 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || |||||| || || ||||||||||| || || || ||||| | ||||| Sbjct 10331 GATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTT 10272 Query 195111 TCCTGTCAAAGTTTTTACGAA 195131 || |||| || || ||||| Sbjct 10271 GCCCGTCAGGGTCTTCACGAA 10251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109467939161087