Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq151 114 1e-19 >seq151 Length=91040 Score = 114 bits (126), Expect = 1e-19 Identities = 253/377 (67%), Gaps = 3/377 (1%) Strand=Plus/Plus Query 552210 AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACA- 552268 || || ||||||||||||||||| |||||||| | || || |||||||| ||||| | Sbjct 42081 AACCCCGATGAGGCTGTTGCCTACGGTGCCGCTGTCCAGGCTGCTATTCTCTCTGGTGAC 42140 Query 552269 AACTGATGAAAAACTACAAA--ATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGT 552326 | || | || | || || | ||| | ||| | || ||| | ||||| ||||| ||| Sbjct 42141 ACCTCCAGCAAGGCCACCAACGAGATTCTCCTTCTCGACGTTGCCCCTCTCTCTCTCGGT 42200 Query 552327 TTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGT 552386 | || || | ||| ||||| ||||| || |||||| | || || |||||||| Sbjct 42201 ATTGAGACCGCTGGTGGTATGATGACCAAGCTTATCCCCCGCAACACCACTATTCCCACC 42260 Query 552387 AAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATT 552446 || || || || || ||||| | || ||||| || ||| ||| || || | Sbjct 42261 AAGAAGTCCGAGGTCTTCTCTACCTTCTCCGATAACCAGCCTGGTGTCCTTATCCAGGTC 42320 Query 552447 TTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAA 552506 | || || || | | ||| || || ||||| | | || | || | | Sbjct 42321 TACGAGGGTGAGCGCCAGCGCACCAAGGACAATAACCTTATGGGCAAGTTCGAGCTCACT 42380 Query 552507 GGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCC 552566 ||||| || |||||||| ||||| || || || ||||| || || |||||| | |||||| Sbjct 42381 GGTATCCCCCCTGCTCCCCGTGGTGTTCCCCAGATTGAGGTCACCTTCGATCTTGATGCC 42440 Query 552567 AATGGAATTTTGAATGT 552583 || || || |||| || Sbjct 42441 AACGGTATCATGAACGT 42457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029245177985890