Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq51 100 2e-16 >seq51 Length=202736 Score = 100 bits (110), Expect = 2e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 29779 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCT 29838 ||||| | ||| || ||| ||| || | || |||||||| ||||| || ||||| || Sbjct 137223 GGCTCGCGCTCAAGTTGAACCTTGAGGGCATCGACGTGATCGAGGTATACATGAGCATCA 137164 Query 29839 CCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 29897 |||| || | ||| || ||| || | ||| | |||||| |||||||||| || Sbjct 137163 CCCATAACATGTGTCAAGCT-TCCAGGGACCAGCTCACAGACGTGCGCCATCATGTGTGT 137105 Query 29898 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTG 29957 || || | ||||||||| ||||| ||||| || ||||| ||||| || | || | || Sbjct 137104 TAGCAGCGCGTAGCTGGCAATGTTGAAGGGAACGCCGAGACCCATATCGCAGGATCGTTG 137045 Query 29958 GTAGAGCTGACA 29969 ||||||||| || Sbjct 137044 GTAGAGCTGGCA 137033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408612814194053