Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq19 338 1e-87 seq17 176 8e-39 >seq19 Length=300009 Score = 338 bits (374), Expect = 1e-87 Identities = 1151/1760 (65%), Gaps = 90/1760 (5%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | ||| |||||||||||| || || || ||||||||||||||||| Sbjct 120333 ACAGTGAACTGGATAGGAGCAGCAGCAGCCTGTGTACGGAGGTAGTACATGCCGGTCTTG 120274 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668 || || ||| |||||| | |||||| |||| ||| |||| | | || Sbjct 120273 AGACCGAGCTT---CCAGCCAGCAAAGTGCAT-GCTGGTGA---TCTTACCCATGGTAG- 120222 Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728 |||| | || || || | ||| || |||||| ||| || ||||| | | Sbjct 120221 --GGTCCT--TCATG-------TGAATGTTGAGAGACTGAGACTGATCAATGAAGGCACC 120173 Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788 | ||| || ||||| | | | | || ||| || | |||||||| |||||| | | Sbjct 120172 ACGGTCCGCAGCCATTTGCACAACCTGTCGCTGAGAAATTTCCCACACAGTCTTGTACAG 120113 Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGT 212845 | |||| || | |||| | |||||||||||| ||||| || | | ||| | Sbjct 120112 AGCCTTGACATCGGCAGGGATGTTGGGGATGTTCTGGACAGAACCGTTATCAGCAATGAT 120053 Query 212846 CAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTG 212905 | | | ||| | ||| ||| |||||| | | || ||| | || Sbjct 120052 ACGGTTCTT---CATAGCATCGGACCAAAGGCCCAAGTCGACAAGATCCTTCAGAAGCCA 119996 Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965 |||||||| | |||||| || || | || || | | ||||| | || || ||||| Sbjct 119995 GGGGTTGACAACCTGGAATTCGCCAGCAAGGACTCGGCGTTGGTAGATATTGGAGGTGTA 119936 Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025 |||||||| || ||||||||| || |||||||| | |||||||| || ||||| ||||| Sbjct 119935 GGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGCGACGTGCTGGCAGTAGGCATAGGAGC 119876 Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCG--CCGAAGCTCTGCCCAG 213083 || || |||||||| | | |||||| | | | | ||| || ||||| Sbjct 119875 AACGAGTAGACTGTTACGGATACCGTGC--GTCTTTACATCCTCCCGTAGGGACTCCCAG 119818 Query 213084 TCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCT 213143 ||||| | |||| | ||| || ||||||||||||||||| | || || Sbjct 119817 TCCCAAAGGTCAGAGGG---------CTTGACATTCCACATGTCAAACTGGAGAATACC- 119768 Query 213144 TTGCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTC 213199 |||| |||| ||||| | | | |||||| ||||| | ||||||||| |||| Sbjct 119767 ---CTCAGAAGCGGGAGAGCCCTTGAAGGTGGAGTAAGGGCCCTCCTCCTTGGCGAGCT- 119712 Query 213200 GCA-GGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCT 213258 ||| || | |||||||||| |||||| || ||||| || | | |||| |||| Sbjct 119711 GCACAGAGGTGGTAAGGGCAGCGTGGTAGATTGTCTCAAAGATTTGCTTGTTCAGCTCAC 119652 Query 213259 TGGCCTCTGGGGACGTGAAGGGCAT-CATCATGCGTTGGAACACATCAGCCAGCCCCTGG 213317 ||||| || ||| ||||||||| | ||| |||| ||||||| || || || Sbjct 119651 GAGCCTCAGGAGACTCGAAGGGCATGCGAAGTGC-AAGGAAGGCATCAGCAAGACCTTGA 119593 Query 213318 ACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTA 213376 || || | ||| ||||||| ||| | || ||| ||| |||| ||| | || ||||| Sbjct 119592 ACGCCAAGGCCAATGGGTCGGTGACGCATGTTGCTGTTGCGAGC-CTCTTGCACAGGGTA 119534 Query 213377 AAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAG 213436 | ||| ||| |||||||| || ||||||||| | ||| || |||| | || Sbjct 119533 ATGGTTTACGTCAATGATCTTATTCAGGTTGCGGACAACGACTCGAGTAACATCGTGGAG 119474 Query 213437 GTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACA-------AACTCAGGCAGGGCGA 213489 | | ||||| |||||| | | || || | || |||||| | | Sbjct 119473 CTTC------TTGAAGTCGTAGCAAGCAT-CTTCATAGTTAATGAAAGAAGGCAGAGACA 119421 Query 213490 TGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGC 213549 | || || |||||||| || ||||| | || | | |||||| |||||||| |||| Sbjct 119420 AGGACGCAAGATTGCAAACAGCGACCTCATCAGGGGCACAGTACTCAATGATCTCAGTGC 119361 Query 213550 ACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAG-AA 213608 |||||||| || ||||||||| || ||||||| ||| ||| ||||| | |||| | Sbjct 119360 ACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGG-TTGCTCTTGCGGTTGCAGTGA 119302 Query 213609 TCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAG 213668 ||||||||||||||| ||||| ||||||||| ||||| | | || || | ||| Sbjct 119301 TCCTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCAA 119242 Query 213669 AGGTACCTGGCCTTGA-CCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGT 213726 || | | ||||||| || || ||| | | | | | |||||||| |||| Sbjct 119241 AGCTTCTGAGCCTTGATAGACTTGC--GACCCTTAC---CCTCTCTCTCGTACTTCTCGT 119187 Query 213727 AGAGCTCGTTGAATTCGTGGCCCCAGACCCT-GTCCAGTCCCGGACAGGATGCGGGACAC 213785 | || | | || |||| || | || | | | || || || || ||| ||| Sbjct 119186 ACAGAGCCTCAAACTCGTCACCGTA-ACAGTCGGCGAGACCAGGGCACTCGTTGGGGCAC 119128 Query 213786 ATGAGGCTCCAGTCCCCG-TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAG 213844 || || |||| || ||| || |||| ||| | || ||| || || || |||| ||| || Sbjct 119127 ATAAGAGTCCATTCGCCGTTCTTCTC-GACACGCTTCATAAAAAGATCAGGGATCCAGAG 119069 Query 213845 CGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAG 213904 || ||||||||| | | | ||| ||| || ||| || || ||||| || Sbjct 119068 AGCCAGGAACAGGTCACGAGCTCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAG 119009 Query 213905 AAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCT 213961 || ||||||| ||| |||||||| ||||| | |||||| || || || || | || | Sbjct 119008 GAACTCAAAGACGTCGGCGTGCCAGGGCTCAAGGTAGATAGCGAATGCACCAGGTCGCTT 118949 Query 213962 CTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAG 214021 ||||| |||||||| || | || ||||||| | ||||| | ||| |||| Sbjct 118948 GTTGCCACCCTGGTCGACATAACGAGCAGTGTTGTTGAATACACGCAGCATGGGAACCAC 118889 Query 214022 CCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCA--GGTTGCTC 214079 |||||||| |||||||| || || || || ||||| | ||| | | | || | Sbjct 118888 GCCGTTGGAAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATTCGGTGAAC 118829 Query 214080 ATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCC 214139 | | || || || ||||| || |||||| |||||||| || | | | || || Sbjct 118828 GTTTA-AG-CCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTGTCG 118771 Query 214140 ATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGC 214199 ||| ||| | |||||||| || | | | | | |||||| || ||||| ||| Sbjct 118770 TAGATACCGTCAATGCTGTCCTCCTTCATATCGACAAGGAAGCATGAGGACAGCTGAGGC 118711 Query 214200 CTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGG 214259 | | || | ||||||||| |||||| ||||| | | |||||| | || | | Sbjct 118710 TGAGGGGTACCGGCGTTGAAAAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTGGACATG 118651 Query 214260 AGCCTGTAGGTCTCCAGGAC 214279 || |||| ||||||| ||| Sbjct 118650 AGGTTGTATGTCTCCAAGAC 118631 >seq17 Length=315547 Score = 176 bits (194), Expect = 8e-39 Identities = 485/735 (66%), Gaps = 29/735 (4%) Strand=Plus/Plus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 |||||||| | || | ||||| || ||||| ||||| || | | |||||||||||| Sbjct 168912 TGGTAGTCGGCAACGCGCTTCTCGAAAAAGTTGGTCTTGCCACCAAGAGAGATGTTCTCC 168971 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCC-AGCAG 47958 |||||| ||||||||| | | || |||||| | ||| || | | ||||| Sbjct 168972 ATGAAGTCGAAGGGGTTTGTGGCCTTGTACACCT-TCTCATTACCGAGAGCAACGAGCAG 169030 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG- 48017 |||| || ||| |||||||||| | ||||||| || ||||||||||| || Sbjct 169031 ACGATCAGCCACGAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCTAGAAGACC 169090 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||| ||| | ||||| || || ||||||| ||| || ||||| || | || | Sbjct 169091 ACAAGGG-AGAGCCTCGGTAAGGAACTCCTGCTCGATGGTAACGGCATCGGTGATGATGT 169149 Query 48078 GCTTAACGCGGGAC-TCTGAGGGTTTGTTGCGCAGGTGCTTG-------GCATAGAGCAT 48129 || || | |||| ||| || ||| || | | | | ||| | Sbjct 169150 CCT------GGATCATCTGC----TTGCTG-GCACGTCCCTTAAGGTGAGAGTGGAGGAG 169198 Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 |||||||| || |||| | || || || ||| ||||||| ||||||||||| || Sbjct 169199 ACAGGCAAAATCGGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTCAG 169258 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 ||||||||||| || | || ||||||||||| || | || || | || |||||| Sbjct 169259 ACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAA 169318 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 ||| ||||| || || || || || || | | | || || | || |||||| Sbjct 169319 GATACCCTCAACAGCAGCAAAGGCAACAAGACGTTGAGCAAATGAGGAGTCCTTGTCCTG 169378 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCG 48369 |||||| || |||||||| |||||||| |||||| || || || || | ||| Sbjct 169379 GATCCATCGAATGGCCCAGTCAGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGTT 169438 Query 48370 GAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTA 48426 |||||| | | | | | | ||| | ||||| | ||||||| | ||| Sbjct 169439 GAAGAGGTATGTTCTTTGGGCAGGCTCCTTGATGTAGGTATCAATGAGCAG---GGAGTA 169495 Query 48427 CATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAA 48486 |||||||||| | ||||| || ||||||||| ||||||||| | ||||| Sbjct 169496 TGTCTCAGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCGGG 169555 Query 48487 CACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGC 48546 | ||| || || | ||||| ||| | || ||||| ||||| || ||||| || || Sbjct 169556 GATCTGGACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATACCATCGGAGGC 169615 Query 48547 AGCAAAGAAGGCAAG 48561 ||| ||||| ||||| Sbjct 169616 AGCGAAGAAAGCAAG 169630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931521609962240