Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq17 199 7e-46 seq19 181 2e-40 >seq17 Length=315547 Score = 199 bits (220), Expect = 7e-46 Identities = 389/569 (68%), Gaps = 7/569 (1%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | ||| |||||| ||||| ||||||||||| Sbjct 169756 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCCGAGGAGATTGATCTT 169697 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTAT---CCAAAGACGAGCAGCATTTTCTCAAG 25593 ||||||| | ||| |||| || | | | | ||| |||||| || || Sbjct 169696 TCCAAGGATCTCCACGACTGGAACAACCGTTTGACTACAGATGAGCAGTTCTTCATCTCC 169637 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 || | | || ||||| || ||||| |||||||| || |||||||| || ||| || Sbjct 169636 CACATTCTTGCTTTCTTCGCTGCCTCCGATGGTATCGTCAACGAGAACCTTGTTGAGCGA 169577 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| | | || || ||| | ||||| || ||||||||||||||||| || Sbjct 169576 TTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTACGGTTTCCAGATCATGATG 169517 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT-GATGACGTACATTACAGACGTCGC 25772 || || | ||||||||| || || ||| | ||| || ||||| | || || Sbjct 169516 GAGAACATCCACTCTGAGACATACTCCCTGCTCATTGAT-ACCTACATCAAGGAGCCTGC 169458 Query 25773 CGAGAGAGATCGGCTGTTTGGTGCCATCGAGCAC-ATACCCAGCATCAAGAGGAAGGCGC 25831 | | ||| || || ||| | || ||| || || ||||| | |||||| Sbjct 169457 CCAAAGAACATACCTCTTCAACGCCGTTGA-CACTATTCCTTGCATCCGAAAGAAGGCTG 169399 Query 25832 GGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCT 25891 |||||||| |||||| | | || | | | |||| | || || || |||| Sbjct 169398 ACTGGGCCATTCGATGGATCCAGGACAAGGACTCCTCATTTGCTCAACGTCTTGTTGCCT 169339 Query 25892 TTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGC 25951 |||||||||| ||||| ||||| ||||||||| | ||||| ||||||||||||||||| Sbjct 169338 TTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCAAGA 169279 Query 25952 AGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTC 26011 || || |||||| || ||| ||| ||||||||||||||| | | || ||||||| Sbjct 169278 AGCGTGGCCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCCCGTGATGAGGGTC 169219 Query 26012 TCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 | |||| ||||||||||| || ||| || Sbjct 169218 TTCACACCGATTTTGCCTGTCTCCTCCAC 169190 >seq19 Length=300009 Score = 181 bits (200), Expect = 2e-40 Identities = 503/759 (66%), Gaps = 17/759 (2%) Strand=Plus/Minus Query 221750 TACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTA 221809 |||| |||||||| || || |||||| || |||||| || |||| || || || Sbjct 119379 TACTCAATGATCTCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTG 119320 Query 221810 GACTTGCGATTGGCAGCG-TCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGC 221868 |||||| ||| ||| | |||||||||||||| ||||| || ||||| ||| || Sbjct 119319 CTCTTGCGGTTG-CAGTGATCCTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGC 119261 Query 221869 CACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGG 221927 | | ||||| || ||| || | |||| || | | | | | | |||||| Sbjct 119260 CTCGAGAATGGCGTACCAAAGCT-TCTGAGCCTTGATAGACTTGCGACCCTTACCCTCTC 119202 Query 221928 TCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTG 221987 ||| | | | || || ||||| | |||||| |||||||| ||| | || || | Sbjct 119201 TCTCGTACTTCTCG-TACAGAGCCT--CAAACTCGTCACCGTAACAGTCGGCGAGACCAG 119145 Query 221988 GACACCTGGCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGA 222047 | ||| | ||| ||||| ||| |||| | ||| | | ||| | || ||| || | Sbjct 119144 GGCACTCGTTGGGGCACATAAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATAAAAA 119085 Query 222048 GGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGT 222107 | || |||||||| || ||| | || || || | | || ||||||| |||| || Sbjct 119084 GATCAGGGATCCAGAGAGCCAGGAACAGGTCACGAGCTCGGACCTCCTCCTTACCGTGGT 119025 Query 222108 TTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCA 222167 | || | ||||| | |||||||| | ||| |||||||| ||||| || |||| || | Sbjct 119024 TCTTTCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCAAGGTAGATAGCGA 118965 Query 222168 GAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATG 222226 || || |||||||||||||||||||| || | ||| ||| | |||||| | Sbjct 118964 ATGCACCAGGTCGCTTGTTGCCACCCTGGTCGA-CATAACGAGCAGTGTTGTTGAATACA 118906 Query 222227 CGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCG 222286 || || | || |||| |||||||| ||||||||| || |||||| | || | Sbjct 118905 CGCAGCATGGGAACCACGCCGTTGGAAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTG 118846 Query 222287 GCCCTCAGGTTACTGGCAGAC----ATGCCGATACCACCGGCGTGTTTCGAGATCATGGC 222342 || | || | | || || | ||| |||||||| || || || |||||||| Sbjct 118845 GCAC---GGATTC-GGTGAACGTTTAAGCCAATACCACCAGCCATCTTGGAAATCATGGC 118790 Query 222343 GCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAA 222402 || ||||||| ||||| ||| || || || ||||||||| | | | || || Sbjct 118789 ACAAGTCTTGAGGGTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATATCGACAAGGAA 118730 Query 222403 ACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGT 222462 || || |||| ||||| | | || || |||||| || || ||||| || || || Sbjct 118729 GCATGAGGACAGCTGAGGCTGAGGGGTACCGGCGTTGAAAAGTGTGGGGGAAGCATGAGT 118670 Query 222463 AAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGAC 222501 ||| | || ||||| || | ||| ||||| | ||| Sbjct 118669 GAAGAACTTGCTGGACATGAGGTTGTATGTCTCCAAGAC 118631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928833642251840