Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq81 105 4e-17 >seq81 Length=153540 Score = 105 bits (116), Expect = 4e-17 Identities = 155/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGA 480608 ||||||||| || ||||| || || || ||| | ||| || || || || | || Sbjct 144153 ACGAAGACGAAGCACAAGGTGGAGAGTCGACTCTTTTTGGATG--TTGTAGTCGGAGAGG 144096 Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668 || | | ||| ||||| ||||| ||||| || ||||| || || || ||||||||||| Sbjct 144095 GTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCAGGAGGAATA 144036 Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTC 480727 ||||||||||| || ||||| ||||| || |||||||||| || | | || Sbjct 144035 CCTTCCTTGTCCTGGATCTTAGACTTGACGTTGTCGATAGTATCAGATGACTCGA-CCTC 143977 Query 480728 AAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGA 480762 ||||||||| || || || || || ||||| |||| Sbjct 143976 AAGGGTAATGGTCTTGCCAGTAAGGGTCTTGACGA 143942 Score = 100 bits (110), Expect = 2e-15 Identities = 158/222 (71%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGA 480608 |||||| || || ||||| || || || ||| | ||| || || || |||| || Sbjct 143871 ACGAAGGCGAAGCACAAGGTGGAGAGTCGACTCTTTTTGGATG--TTGTAGTCAGAGAGG 143814 Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668 || | || || || ||||| || || ||||| | || || || ||||||||||| Sbjct 143813 GTACGACCGTCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATG 143754 Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTC 480727 ||||||||||| || ||||| |||||| || |||||||||| || | | || Sbjct 143753 CCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCAGATGACTCGA-CCTC 143695 Query 480728 AAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||| || || || |||||||| ||||| ||||| ||||| Sbjct 143694 AAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTG 143653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268137978047228