Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq94 109 6e-19 >seq94 Length=145285 Score = 109 bits (120), Expect = 6e-19 Identities = 264/396 (67%), Gaps = 9/396 (2%) Strand=Plus/Minus Query 138187 CAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAAT 138246 |||||||||| || ||||| || ||||| || || ||||||||||| ||||| || | | Sbjct 7844 CAATAGGACCGACACCAGGGCCACCACCACCGTGGGGAATACAGAAGGTCTTGTGGAGGT 7785 Query 138247 TTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTA 138306 | ||||| || ||||| || || ||||| || ||||| | ||| || || | Sbjct 7784 TAAGATGGCAGACATCAGCGCCGATGTCACCGGGAGAGCAGAGACCAATCTGGGCGTTCA 7725 Query 138307 GATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATCTGTC 138366 || ||||| || | || || ||||||| | || ||||| | | ||| | ||| Sbjct 7724 TGTTGGCACCGTCCATGTAGACAAGACCACCGTGCTCGTGAACAAGGTCACAGACCTGCT 7665 Query 138367 TGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAGAGTT 138426 |||| | | || || ||||| || || ||||| || | |||||| | || | Sbjct 7664 TGATCTCAGGCTCGAAAACACCGAAGGTGGAAGGATAGGTGACCATAATGGCAGCAAGCT 7605 Query 138427 CAAATGTATTCATGATTGCTTTCTT---CTCTAGATCTTTGATGTCTATGTTGCCA-TCA 138482 || | | | || || ||| || ||||| | ||||| | ||| ||| || Sbjct 7604 CATCAGCGTGCTTG---GCACACTTGGCCTTAAGATCCTCAATGTCCAGGTTACCAGTCT 7548 Query 138483 T--CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAG 138540 | | |||||||||||| || || ||||| || |||||| ||||| ||||| || | Sbjct 7547 TGCCGTCACACTTGACAGTGACGACCTTCATACCAGCCATGGCTGCAGAGGCAGGGTTGG 7488 Query 138541 TTCCATGTGCTGACTCTGGTATCAGACATACATTTC 138576 | || || || || | || ||||| || || |||| Sbjct 7487 TACCGTGGGCGGAAACGGGGATCAGGCAGACCTTTC 7452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578991444781720