Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq19 214 2e-50 seq17 111 2e-19 seq156 82.4 9e-11 >seq19 Length=300009 Score = 214 bits (236), Expect = 2e-50 Identities = 567/852 (67%), Gaps = 17/852 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| | ||||| || || | |||||| || || || || || |||| Sbjct 118574 CCTCAGCACATGATTATGCGTGTTGCTGTTGGCATCTGGGGTGATGATATCGAGCGTGTC 118633 Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329 |||||||||||| || |||||| |||| | | ||| ||| || | || || || | Sbjct 118634 TTGGAGACATACAACCTCATGTCCAGCAAGTTCT--TCACTCATGCTTCCCCCACACTTT 118691 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||| || ||||| || || ||| ||||| ||||||||| ||| | ||||||| Sbjct 118692 TCAACGCCGGTACCCCTCAGCCTCAGCTGTCCTCATGCTTCCTTGTCGATATGAAGGAGG 118751 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 || || |||||||||| | || || | | ||||| || || ||| ||||| Sbjct 118752 ACAGCATTGACGGTATCTACGACACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCTG 118811 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509 | |||||||| | || | || | | |||| | ||| ||| || || | Sbjct 118812 GTGGTATTGGCTTAAACGTTCACCGAATCCGTGCCACTGGCTCTTACATTGCCGGTACCA 118871 Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569 | ||| || | || | |||| ||||| || ||||| ||| ||| || || |||| Sbjct 118872 ACGGTACTTCCAACGGCGTGGTTCCCATGCTGCGTGTATTCAACAACACTGCTCGTTATG 118931 Query 75570 TAAATCAAGCGGGGCGTC--GCAAGG-GGTCCAT-CGCGGTCTACTTGGAACCATGGCAT 75625 | | || | | ||| | || | ||| ||| ||| ||||| | || || ||||| Sbjct 118932 TCGACCAGG-GTGGCAACAAGCGACCTGGTGCATTCGCTATCTACCTTGAGCCCTGGCAC 118990 Query 75626 GCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGT 75685 ||||| || | ||||||||||| | ||| ||||| ||| | || |||| || | Sbjct 118991 GCCGACGTCTTTGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGAGCT 119050 Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGT 75745 | || || || | || ||||| || || ||||| |||||||| || ||| || Sbjct 119051 CGTGACCTGTTCCTGGCTCTCTGGATCCCTGATCTTTTTATGAAGCGTGTCGAGAAGAAC 119110 Query 75746 GGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAG 75805 || ||||| ||||| | || || || || || |||||| ||||| ||||| Sbjct 119111 GGCGAATGGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTCGCCGACTGTTACGGTGAC 119170 Query 75806 GAGTTTGAAGCCCTCTACACAAAGTATGAAGAG-GAGGGTA-GAGCCAATGCGACTGTAC 75863 |||||||| || || ||| ||||| || ||| ||||||| | | | || | | || Sbjct 119171 GAGTTTGAGGCTCTGTACGAGAAGTACGA-GAGAGAGGGTAAGGGTC---GCAAGTCTAT 119226 Query 75864 CA-GCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 || | | | || | ||||| | || |||||| | | ||||| ||||| |||| || | Sbjct 119227 CAAGGCTCAGAAGCTTTGGTACGCCATTCTCGAGGCCCAGACAGAGACCGGAAACCCCTT 119286 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 ||||| ||||||||| || ||| ||||| ||||||||||| | || || ||| Sbjct 119287 CATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGTACCATCCG 119346 Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041 ||||| || || ||||| || || | |||||| | |||||| |||||||| Sbjct 119347 AAGCTCCAACCTGTGCACTGAGATCATTGAGTACTGTGCCCCTGATGAGGTCGCTGTTTG 119406 Query 76042 CAATTTGGCATC 76053 |||| | || || Sbjct 119407 CAATCTTGCGTC 119418 >seq17 Length=315547 Score = 111 bits (122), Expect = 2e-19 Identities = 329/499 (66%), Gaps = 10/499 (2%) Strand=Plus/Minus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCG 65081 |||||||| | ||||| || |||| | | |||| | ||| ||| || || | || Sbjct 169408 AAGAAGGCTGACTGGGCCATTCGATGGATCCAGGACAAGGACTC-CTCATTTGCTCAACG 169350 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141 ||| |||| ||||| ||| ||||||||||||||| ||| | || | | || | Sbjct 169349 TCTTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTT 169290 Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201 ||| | |||||||| || |||||||| || || |||||| || || || || ||||| Sbjct 169289 CTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCCCG 169230 Query 65202 AGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAATAGAC- 65260 ||||||||||| ||| || |||||| || ||| || | || | ||| ||| Sbjct 169229 TGATGAGGGTCTTCACACCGATTTTGCC-TG--TCTCCTCCACTCTCACCTTAAGGGACG 169173 Query 65261 --CCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTT 65318 ||| | | | ||||| | |||| | | || || ||| || ||| | | ||| Sbjct 169172 TGCCAGCAAGCAGATGATCCAGGACATCATCACCGATGCCGTTACCATCGAGCAGGAGTT 169113 Query 65319 CATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTA 65378 | | || || ||||| ||| ||| | || |||||||| | ||| |||| Sbjct 169112 CCTTACCGAGGCTCTCCCTTGTGGTCTTCTAGGCATGAACTCCAACCTCATGAAGCAGTA 169053 Query 65379 CATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGG-GGTGCCACCCATTTGGAACG 65437 ||| |||| ||| | |||||||| ||| | || || | | | || | Sbjct 169052 CATCGAGTTCGTGGCTGATCGTCTGCTCGTTGCTCTCGGTAATGAGA-AGGTGTACAAGG 168994 Query 65438 CGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTG 65497 | | || || || ||||| ||||| ||||| |||| ||| ||||||||||| || | Sbjct 168993 CCACAAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGTGGCAAGACCAACTTTTTCG 168934 Query 65498 AGAAGCGAGTTGGGGACTA 65516 ||||||| |||| ||||| Sbjct 168933 AGAAGCGCGTTGCCGACTA 168915 >seq156 Length=87667 Score = 82.4 bits (90), Expect = 9e-11 Identities = 193/284 (68%), Gaps = 12/284 (4%) Strand=Plus/Plus Query 175213 GCCAAAGATGAACTTGAAGAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTG-G 175271 ||||| || ||||| | || | || || ||| | ||| ||||| |||| ||| | | Sbjct 15781 GCCAAGGAAGAACTCCAGGAAGTCGTCGAGTTTTTGAAG-AACCCT-GAGAAGTTTAGCG 15838 Query 175272 AAGT-GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGA 175330 | | ||||||||| | ||| |||| ||| || | ||| || ||||| || |||| Sbjct 15839 ACCTCGGTGCCAAGCTTCCCAAGGGCGTCCTCCTGGTTGGTCCCCCCGGTACTGGTAAGA 15898 Query 175331 CCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCG 175390 | || || || |||||| | || |||||| | ||| || ||| || | |||| Sbjct 15899 CGCTTCTTGCTCGAGCCGTTGCCGGTGAAGCCGGTGTTCCTTTCTTCTACATGTCTGGTA 15958 Query 175391 CAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAA 175450 | |||| ||||| ||||||||||| |||||||| | || ||||| ||||| Sbjct 15959 GCGAGTTTGACGAGATCTTTGTTGGTGTTGGTGCCAAGCGAGTCCGCGAGCTCTT----C 16014 Query 175451 TCGCCCGCGAAAATCAA---CCATG-TATTGTCTTCATTGATGA 175490 | |||| |||| ||| || || |||||||| || ||||| Sbjct 16015 ACTGCCGCCAAAAACAAGTCCCCTGCCATTGTCTTTATCGATGA 16058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596562433707680