Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq17 176 1e-38 seq96 134 4e-26 seq19 129 2e-24 seq41 118 3e-21 seq151 86.0 2e-11 >seq17 Length=315547 Score = 176 bits (194), Expect = 1e-38 Identities = 262/369 (71%), Gaps = 2/369 (1%) Strand=Plus/Minus Query 133305 CCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACAT 133364 |||| || || ||| || || | ||||| |||||| || ||||| ||| |||| Sbjct 169554 CCGAGGCTCGATGCTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCTGAGACAT 169495 Query 133365 ATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAAC-TATTCAAC 133423 | || || |||||||| |||||||| || | | ||| ||| ||| || | |||||| Sbjct 169494 ACTCCCTGCTCATTGATACCTACATCAAGGAGCCTGCCCA-AAGAACATACCTCTTCAAC 169436 Query 133424 GCCATTAGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAG 133483 ||| || | ||||||| || |||||| |||||||||| ||| |||||||||| Sbjct 169435 GCCGTTGACACTATTCCTTGCATCCGAAAGAAGGCTGACTGGGCCATTCGATGGATCCAG 169376 Query 133484 GACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAttttt 133543 |||||| | |||||| ||||| ||||| ||||||| || ||||| || || Sbjct 169375 GACAAGGACTCCTCATTTGCTCAACGTCTTGTTGCCTTTGCTGCTGTTGAGGGTATCTTC 169316 Query 133544 ttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTG 133603 ||||| ||||| || ||| || || ||||| || |||||||| | | ||||| ||| Sbjct 169315 TTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTG 169256 Query 133604 TGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTA 133663 || || ||||| || || || | || |||| ||||||||||| |||||| | | Sbjct 169255 ACCTTCTCCAACGAGCTCATCTCCCGTGATGAGGGTCTTCACACCGATTTTGCCTGTCTC 169196 Query 133664 CTTCACTCT 133672 || |||||| Sbjct 169195 CTCCACTCT 169187 >seq96 Length=142780 Score = 134 bits (148), Expect = 4e-26 Identities = 199/282 (71%), Gaps = 0/282 (0%) Strand=Plus/Minus Query 302583 CTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAG 302642 ||||| || || |||||||| ||||||||| || || || || || |||||||| || Sbjct 56904 CTTGACCAATCGTCGCTGAATGTAACCAGTTTCAGCAGTCTTGACCGCAGTATCAATAAG 56845 Query 302643 ACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAA 302702 ||| | |||||| |||| || |||||||| | ||| || || || | || | Sbjct 56844 ACCTTCTCGACCAGCCATGGCGTGGAAGAAAAACTCGCTAGGAGTCAGGCCACGAAGGTA 56785 Query 302703 GGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAG 302762 ||| |||| ||||||||||| || ||||| || | || |||||| ||||| ||||| Sbjct 56784 AGAGTTCTCGACGAAACCACGAGCTTCGGGAGAGTAATCATCCTTGGTGAAGTGAGGCAG 56725 Query 302763 GGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCA 302822 || | || || | | ||| | || || |||||||| || || | ||||| || | Sbjct 56724 AGTACGGTACTTAAAACCGAAAGGAATGCGCTTTCCTTCGACAATTTGCTGACCGACAAG 56665 Query 302823 CGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCC 302864 || | ||||||| |||||||| | | | |||||||| || Sbjct 56664 CGCAGTCATCTGTGAAATATTGATAGAAGAACCCTTGGAACC 56623 >seq19 Length=300009 Score = 129 bits (142), Expect = 2e-24 Identities = 561/877 (64%), Gaps = 19/877 (2%) Strand=Plus/Minus Query 155592 GACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAGCAC 155651 ||||| ||||| || || || ||| | | | | ||| || | |||||| |||| Sbjct 119418 GACGCAAGATTGCAAACAGCGACCTCATCAGGGGCACAGTACTCAATGATCTCAGTGCAC 119359 Query 155652 AGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCC 155711 ||||| || || |||||| || | ||||| ||||| || | ||| || |||| Sbjct 119358 AGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCC 119299 Query 155712 TTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAGAGG 155771 ||||| || ||| | ||| |||| ||||| |||| || || ||||| ||| || Sbjct 119298 TTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCAAAGC 119239 Query 155772 TCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACAGCGTT 155831 | | || || || |||| | || || ||| || ||| ||||| | Sbjct 119238 TTCTGAGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCGTACAGAGCC 119179 Query 155832 CGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACAGCGAC 155891 | || ||||||||||| || || |||||||||| | |||||| | || | | Sbjct 119178 TCAAACTCGTCACCGTAACAGTCGGCGAGACCAGGGCACTCGTTGGGGCACATAAGAGTC 119119 Query 155892 CAAATT-----TTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCAT 155946 || || || || ||| |||||| |||||| | |||| ||| | ||| Sbjct 119118 CA--TTCGCCGTTCTTCTCGA---CACGCTTCATAAAAAGATCAGGGATCCAGAGAGCCA 119064 Query 155947 AGAAAAGGTCCCTTGCCTTTGAC-TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAAT 156005 ||| ||||| | || | ||| ||||| | ||||| ||||| || || || | ||| Sbjct 119063 GGAACAGGTCACGAGC-TCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAAC 119005 Query 156006 TCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG--- 156062 || | || | || ||||| || || ||||| || |||| | |||| Sbjct 119004 TCAAAGACGTCGGCGTGCCAGGGCTCAAGGTAGATAGCGAATGCACCAGGTCGCTTGTTG 118945 Query 156063 CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCA 156122 |||||||| || ||||| |||||||| || ||||| |||| ||||| |||| | || Sbjct 118944 CCACCCTGGTCGACATAACGAGCAGTGTTGTTGAATACACGCAGCATGGGAACCACGCCG 118885 Query 156123 TTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGT 156182 |||||||| || ||||| ||| ||| | || |||| | || | |||| | | Sbjct 118884 TTGGAAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATTCGGTGAACGTTT 118825 Query 156183 AGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAAT 156241 | ||||||||||| | |||| || ||||| || || ||| | || | | | || Sbjct 118824 AAGCCAATACCACCAG-CCATCTTGGAAATCATGGCACAAGTCTTGAGGGTGTCGTAGAT 118766 Query 156242 ACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGG 156301 ||| ||||| || || | ||| | || |||| || | ||||| | || Sbjct 118765 ACCGTCAATGCTGTCCTCCTTCATATCGACAAGGAAGCATGAGGACAGCTGAGGCTGAGG 118706 Query 156302 TGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAATC 156361 || || |||||||| ||||| || | |||||| | || |||| | ||||| | Sbjct 118705 GGTACCGGCGTTGAAAAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTGGACATGAGGTT 118646 Query 156362 GTATGTCTCCTTAATCTTCTCAAGATTA-GACCCGTGAATACAGATAGAGACCCTCATCC 156420 |||||||||| | ||| | || | |||| | || | | || || | ||| Sbjct 118645 GTATGTCTCCAAGACACGCTCGATATCATCACCCCAG-ATGCCAACAGCAACACGCATAA 118587 Query 156421 ACATATGCTGAGGACGCTCTACAATCACTCCATCAAT 156457 ||| |||||||||||||| |||| |||||||| Sbjct 118586 TCATGTGCTGAGGACGCTCAGCAATTTTGCCATCAAT 118550 >seq41 Length=230506 Score = 118 bits (130), Expect = 3e-21 Identities = 384/587 (65%), Gaps = 12/587 (2%) Strand=Plus/Minus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 ||||| ||||| | | || || ||||| | | ||||||| || | ||| | || || Sbjct 94671 ATAAGTCCACAAATTTCGCAAACGTGGACTCGGAAAGCATCCGACACCTCAAACAGACGC 94612 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 |||| |||| || |||||||| | ||||||||||||||| ||||| || ||||| Sbjct 94611 TCCTTCAAGAAGGCAGCAGCACCGTGGGCAATCATACAATCACGTTCCATCTCTCCGAAT 94552 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGA 251586 || ||||||||||| ||||| | ||| ||| ||||||| || || | | | | ||| Sbjct 94551 CGCAGACCACCATCTCGAGCACGACCTTCGACAGGCTGTCGGGTCATAATCTGAACGGGA 94492 Query 251587 CCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCG 251646 || | ||| || || |||| ||||| || |||||||||||| ||| Sbjct 94491 CCACGAGCACGGGCGTGAATTTTGTCATCCACCATGTGACGAAGACGCTGGTAGTATGTA 94432 Query 251647 GGACCGATGAAGA--TGCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTT 251704 || |||| ||||| || | | || |||| ||| || | | || ||||| || | Sbjct 94431 GGTCCGAAGAAGACTTGAGC-ACGGAGCTTGC-GTCCGGTATGGCCATTGTACATGACCT 94374 Query 251705 CGTTTCCATTAGATTCATAACCAAG-TTTCT--GTAGCTCTGAAGCAATATCACCAATCT 251761 || || ||||| ||||| | ||||| || || || | | | | Sbjct 94373 CGAAACCTCGAGATTGGTAACCGTGCTTTCTCAAAAGTTCAGACACGGAGT---CGACGG 94317 Query 251762 TGAATTTGCTAAAACTGGTGCCGTCTCCGTAAAGACCCATTTGAATCAACACTTTGCCTA 251821 ||| | | || || |||| || | | ||| | | | || || | | Sbjct 94316 TGACATCAGTGAATGGCGTTGCGTCACCCTCCATGCCCTCCAGTGTTGAGACCTTACTCA 94257 Query 251822 AAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGA 251881 |||| ||| ||| ||||| || ||||||||| ||||| || || || ||||||| Sbjct 94256 AAAGACACTCGATCAAATGGGCAATTGTCATACGAGACGGAATGGCGTGAGGGTTGATGA 94197 Query 251882 TGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTT 251940 | || || ||| |||| || || |||| |||||||||| | || |||| | Sbjct 94196 TAATATCAGGTGTCAGACCTTCTCTGCTGAAAGGCATATCCTCCT-GTCGATAAGTAACA 94138 Query 251941 CCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 || || || |||||||| |||||||||||| ||||| |||||||| Sbjct 94137 CCGATTGTACCCTTTTGACCGTGACGAGAAGCAAACTTGTCACCAAT 94091 >seq151 Length=91040 Score = 86.0 bits (94), Expect = 2e-11 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 233272 AGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATT 233331 |||||||| || |||| |||||||||||||||||| || | ||| | ||||||||| Sbjct 14642 AGCACCGTAGGCGATCAAACAATCACGTTCCATTTCTCCCAAACGTAAACCACCATCTCG 14701 Query 233332 TGACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATT 233391 ||| | ||| | | ||| ||||| || | || || |||||| | | ||| | | Sbjct 14702 TGAACGACCTTCCGTAGGTTGGCGAGTCAAGATAGCTCGTGGACCTCGGGATCGAGAGTG 14761 Query 233392 AATTTTATCTTTAACCATATGCTTCAGTCTCATATAATAA 233431 || || |||| ||||| ||||| |||| | ||||||| Sbjct 14762 CATCTTGTCTTGCACCATGTGCTTGAGTCGCTGATAATAA 14801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471799477785857