Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq17 131 3e-24 seq2 127 3e-23 seq19 105 1e-16 seq276 98.7 2e-14 >seq17 Length=315547 Score = 131 bits (144), Expect = 3e-24 Identities = 208/294 (71%), Gaps = 11/294 (4%) Strand=Plus/Plus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGG---CACAGAAACTGCCCGAG 794433 || || ||||||||||| |||||||||||||| ||||||| || || || || | Sbjct 169257 AGACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCT---G 169313 Query 794434 AAAAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCC 794493 || ||||| ||||| || || |||||| | || || || | ||||| | | | || Sbjct 169314 AAGAAGATACCCTCAACAGCAGCAAAGGCAACAAGACGTTGAGCAAATGAGGA---GTCC 169370 Query 794494 TCTTTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCG 794553 | | | |||||| || ||||| || ||||| || | | | || | ||||| Sbjct 169371 TTGTCCTGGATCCATCGAATGGCCCAGTCAGCCTTCTTTCGGATGCAAGGAATAGTGTCA 169430 Query 794554 ATGGCGCGAAAGAGGTG-GTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAG 794612 | |||| ||||||| || ||| | | | || ||||||| |||||| || ||||| || Sbjct 169431 ACGGCGTTGAAGAGGTATGTTCTT-TGGGCAGGCTCCTTGATGTAGGTATCAATGAGCAG 169489 Query 794613 CGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 ||||| ||||| ||||||||||| || || ||||||||| || || ||||| Sbjct 169490 GGAGTATGTCTCAGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCA 169543 Score = 104 bits (114), Expect = 4e-16 Identities = 180/258 (70%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951 ||| || ||||| || ||| | |||||| ||||||||||||||||||||| | || Sbjct 168899 GACACCGGCCTTTTGGTAGTCGGCAACGCGCTTCTCGAAAAAGTTGGTCTTGCCACCAAG 168958 Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG 794011 ||||| |||||| | ||| ||||| | | | ||| |||||| ||||| Sbjct 168959 AGAGATGTTCTCCATGAAGTCGAAGGGGTTTGTGGCCTTGTACACCTTCTCATTACCGAG 169018 Query 794012 CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCAT 794071 | | ||||| || || || ||||| || |||||||| ||||||| || |||||| Sbjct 169019 AGCAACGAGCAGACGATCAGCCACGAACTCGATGTACTGCTTCATGAGGTTGGAGTTCAT 169078 Query 794072 GCCGATGAGCGCCAC-GGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 ||| | || |||| || || | |||| | | ||||| | |||||| ||||| | Sbjct 169079 GCCTA-GAAGACCACAAGGGAGAGCCTCGGTAAGGAACTCCTGCTCGATGGTAACGGCAT 169137 Query 794131 CGATGATGATCTGCCTGG 794148 || ||||||| | ||||| Sbjct 169138 CGGTGATGATGT-CCTGG 169154 >seq2 Length=836158 Score = 127 bits (140), Expect = 3e-23 Identities = 91/105 (87%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 2035651 CCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTA 2035710 ||||||| |||||||| |||||||| ||||| | || |||||||| || |||||| | | Sbjct 13394 CCAACTATCTCGACATTAAGCCCCTTCTCGACGTCGGATGCAAGACTGTCGCCAACATGA 13335 Query 2035711 TCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755 |||||||||||||||| ||||| |||||||||||||| ||||||| Sbjct 13334 TCAAGGGCAAGTCGCCAGAGGAGATCCGCAAGACCTTCAACATCA 13290 >seq19 Length=300009 Score = 105 bits (116), Expect = 1e-16 Identities = 178/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||||||||| || || |||| ||| || || || |||||||| || | ||||||||| Sbjct 118939 CTGGTCGACATAACGAGCAGTGTTGTTGAATACACGCAGCATGGGAACCACGCCGTTGGA 118880 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 |||||||| || || | ||| | ||| | ||| || | ||| || ||||| Sbjct 118879 AGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATTCGGTGAACGTTTAAGCC 118820 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || || ||| |||||| || | || || | || || || |||||||| || || Sbjct 118819 AATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTGTCGTAGATACCGTC 118760 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || ||| ||||||| || | || ||||| || || || || | | || || Sbjct 118759 AATGCTGTCCTCCTTCATATCGACAAGGAAGCATGAGGACAGCTGAGGCTGAGGGGTACC 118700 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 ||| ||||| || ||||| Sbjct 118699 GGCGTTGAAAAGTGTGGG 118682 >seq276 Length=18780 Score = 98.7 bits (108), Expect = 2e-14 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||| ||||||||||||||||| ||||| |||||| |||| || || ||| | | Sbjct 14108 GTACTTGGTAACGGCCTTGGTACCCTCAGAGACAGCGTGCTTGGCAAGCTCACCGGGGAG 14167 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||| ||||| || | |||||||||||| |||| Sbjct 14168 GATGAGGCGGACAGAGGTCTGGATCTCTCGGG 14199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916144174046879