Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq126 122 6e-23 seq81 109 4e-19 seq82 102 5e-17 >seq126 Length=117423 Score = 122 bits (134), Expect = 6e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | || ||||||||| ||||| ||||| ||| |||| |||| Sbjct 31064 AGGACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 31005 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || || ||||| ||||| |||||||| | || | ||||||||||| Sbjct 31004 TCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 30945 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | ||| || |||| ||| || ||| Sbjct 30944 TGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 30885 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 || |||||||||||||| || || ||||||||||| Sbjct 30884 TTCCCCGTGAGGGTCTTGACGAAAATCTGCATGAT 30850 >seq81 Length=153540 Score = 109 bits (120), Expect = 4e-19 Identities = 145/199 (73%), Gaps = 8/199 (4%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| || || ||||| ||||| || ||| | || | || || || ||||| |||||||| Sbjct 143841 CTCTTTTTGGATGTTGTAGTCAGAGAGGGTACGACCGTCCTCGAGCTGCTTGCCGGCGAA 143782 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||| ||| |||||||| | || | || |||||||| | || || ||||| | Sbjct 143781 AATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGACTTGAC--A 143724 Query 34906 TGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961 | | ||||| ||| | |||||| |||| ||| |||||||| || |||||||||| Sbjct 143723 T--TGTCGATAGTATCAGATGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCT 143666 Query 34962 TTACAAAGATCTGCATGAT 34980 | || ||||| |||||||| Sbjct 143665 TGACGAAGATTTGCATGAT 143647 >seq82 Length=153091 Score = 102 bits (112), Expect = 5e-17 Identities = 136/187 (73%), Gaps = 8/187 (4%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| || ||| | || |||| || || ||||| || ||||| Sbjct 10433 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCGAA 10374 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| ||| || ||||| | || | ||||||||||| | || || ||||| | Sbjct 10373 GATCAATCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGAC--A 10316 Query 34906 TGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961 | | ||||| || || |||||| || | ||| |||||||| ||||| ||||||| Sbjct 10315 T--TGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCT 10258 Query 34962 TTACAAA 34968 | || || Sbjct 10257 TCACGAA 10251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325688985424859