Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq151 143 2e-28 seq96 96.9 3e-14 >seq151 Length=91040 Score = 143 bits (158), Expect = 2e-28 Identities = 698/1100 (63%), Gaps = 13/1100 (1%) Strand=Plus/Minus Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439 ||| ||||| ||| || ||||| ||| || || || |||| | || || | Sbjct 42509 ATTGGTAATGACAATCTTGTTGGACTTGCCGGTACCCTTCTCGACGGCGGAGACGTTCAT 42450 Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499 ||||| |||||||| | ||| || ||||| ||||| || || || || | ||||||| Sbjct 42449 GATACCGTTGGCATCAAGATCGAAGGTGACCTCAATCTGGGGAACACCACGGGGAGCAGG 42390 Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 281559 ||||| || | | || | |||| | ||||| || || ||| | || || Sbjct 42389 GGGGATACCAGTGAGCTCGAACTTGCCCATAAGGTTATTGTCCTTGGTGCGCTGGCGCTC 42330 Query 281560 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 281619 ||||||| | | |||||| || ||| || ||||| || | || | || || Sbjct 42329 ACCCTCGTAGACCTGGATAAGGACACCAGGCTGGTTATCGGAGAAGGTAGAGAAGACCTC 42270 Query 281620 GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679 ||| || || ||||| || ||||| | |||| |||||||| ||||||||||| Sbjct 42269 GGACTTCTTGGTGGGAATAGTGGTGTTGCGGGGGATAAGCTTGGTCATCATACCACCAGC 42210 Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 281737 || || | ||| ||||| ||||| | || || | |||| ||| | || | | || Sbjct 42209 GGTCTCAATACCGAGAGAGAGAGGGGCAACGTCGAGAAGGAGAATCTCGTTGGTGGCCTT 42150 Query 281738 TCATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 281796 | || | | |||| |||||||| || || | ||| ||||| || |||||||| || Sbjct 42149 GCTGGAGGTGTCACCAGAGAGAATAGCAGCCTGGACAGCGGCACCGTAGGCAACAGCCTC 42090 Query 281797 ATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT 281856 ||| || || | | | || | | || || ||||| | | | | || | ||| Sbjct 42089 ATCGGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTGAAGTAGTCGGTGATGAGCT-TCT 42031 Query 281857 T-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTAT 281915 || || ||||| | ||||| || || | || || || || || | || || | Sbjct 42030 GGACACGGGGGATACGGGTAGATCCACCGACGAGGACGATCTCGTGGACAAGGGACTTGT 41971 Query 281916 CCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTG 281975 | | || | || | || || ||||| | | | || || || | || Sbjct 41970 CGATCTTGGCGTCAGTGAGGACACGGTCGACGGGCTGGATAGTAGATCGGAAGAGATCCT 41911 Query 281976 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAA 282033 || || || ||||| ||| | || || || | || || ||||| || ||||| Sbjct 41910 GGCAGAGCTCCTCGAAACGAGCACGGGT--GATGGAGGTGTAGAAGTCAATACCCTCGAA 41853 Query 282034 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 282093 | ||| || | || || | || |||| |||||||| || | || || ||||| || Sbjct 41852 AAGAGAGTCGATCTCGATGGAGGTCTGAGCGGAAGAAGAGAGAGTTCGCTTGGCACGCTC 41793 Query 282094 ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTC--AAATCTGTTTTATAT 282151 ||| || || | || | ||| | || | |||| | | || || |||||| Sbjct 41792 ACAAGCGGTTCGAAGGCGTCGGAGAGCACGAAC--ATTGGTGCCCAAGTCCTTTTTATGC 41735 Query 282152 TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCC 282211 |||| |||||| || | ||| | | || ||||| ||||| ||||||||||| ||| Sbjct 41734 TTTCGCTTGAACTCGTTAACGAAGTGGTTGACCAGACGGTTATCGAAATCTTCACCACCC 41675 Query 282212 AATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGA 282271 || | ||| | || | |||| | || | ||| | || || |||| | | ||| Sbjct 41674 AAGTGAGTGTCACCGGCGGTAGACTTGACCTCGAAGATACCCTCCTCAATGGTGAGGAGA 41615 Query 282272 GTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG 282331 | ||||| || |||||||| | ||| || ||||| || || || || Sbjct 41614 GAGACATCGAAAGTACCACCACCAAGATCGAAGATAAGGACGTTGCGCTCGCCCTCAACC 41555 Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || || || ||||| || |||| |||||||| || || || || || |||| | ||| Sbjct 41554 TTCTTGTCGAGACCGTAGGCAATGGCAGCAGCGGTAGGCTCGTTGATGATTCGGAGAACG 41495 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || || || ||||| || || || || || || || | || || ||||| || || Sbjct 41494 TTGAGGCCGGCAATGAGACCAGCGTCCTTGGTAGCCTGGCGCTGAGAGTCGTTGAAGTAG 41435 Query 282452 GCAGGAACAGTAATAACGGC 282471 || || ||||| | |||||| Sbjct 41434 GCGGGGACAGTGACAACGGC 41415 >seq96 Length=142780 Score = 96.9 bits (106), Expect = 3e-14 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 ||||| ||||| ||| | |||| || |||||||| |||||||||||| | ||||||||| Sbjct 55366 GGTAAGGAAGGCCGTCTCCGAGGTAACTTGATGGGTAAGCGTGTCGATTTCTCTGCACGT 55425 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || |||||| |||| | || | ||||| | || || ||||| |||| || ||| Sbjct 55426 ACTGTCATTACTGGTGATGCCAACCTCTCTCTCCACGAGGTCGGTGTGCCTCGCAGCATT 55485 Query 432408 GCGAAAAATCTTACTT 432423 || | | ||| |||| Sbjct 55486 GCCAGGACTCTCACTT 55501 Score = 86.0 bits (94), Expect = 5e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192 || ||||||||||| | ||||||||||| |||||| ||||| |||| || | || ||| Sbjct 56809 GAGTTTTTCTTCCACGCCATGGCTGGTCGAGAAGGTCTTATTGATACTGCGGTCAAGACT 56868 Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGA 435239 ||||| |||||||| ||||| || | | |||||| ||||| || Sbjct 56869 GCTGAAACTGGTTACATTCAGCGACGATTGGTCAAGGCTCTTGAGGA 56915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740583218961186