Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24]
961 sequences; 37,784,234 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq151 143 2e-28
seq96 96.9 3e-14
>seq151
Length=91040
Score = 143 bits (158), Expect = 2e-28
Identities = 698/1100 (63%), Gaps = 13/1100 (1%)
Strand=Plus/Minus
Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439
||| ||||| ||| || ||||| ||| || || || |||| | || || |
Sbjct 42509 ATTGGTAATGACAATCTTGTTGGACTTGCCGGTACCCTTCTCGACGGCGGAGACGTTCAT 42450
Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499
||||| |||||||| | ||| || ||||| ||||| || || || || | |||||||
Sbjct 42449 GATACCGTTGGCATCAAGATCGAAGGTGACCTCAATCTGGGGAACACCACGGGGAGCAGG 42390
Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 281559
||||| || | | || | |||| | ||||| || || ||| | || ||
Sbjct 42389 GGGGATACCAGTGAGCTCGAACTTGCCCATAAGGTTATTGTCCTTGGTGCGCTGGCGCTC 42330
Query 281560 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 281619
||||||| | | |||||| || ||| || ||||| || | || | || ||
Sbjct 42329 ACCCTCGTAGACCTGGATAAGGACACCAGGCTGGTTATCGGAGAAGGTAGAGAAGACCTC 42270
Query 281620 GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679
||| || || ||||| || ||||| | |||| |||||||| |||||||||||
Sbjct 42269 GGACTTCTTGGTGGGAATAGTGGTGTTGCGGGGGATAAGCTTGGTCATCATACCACCAGC 42210
Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 281737
|| || | ||| ||||| ||||| | || || | |||| ||| | || | | ||
Sbjct 42209 GGTCTCAATACCGAGAGAGAGAGGGGCAACGTCGAGAAGGAGAATCTCGTTGGTGGCCTT 42150
Query 281738 TCATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 281796
| || | | |||| |||||||| || || | ||| ||||| || |||||||| ||
Sbjct 42149 GCTGGAGGTGTCACCAGAGAGAATAGCAGCCTGGACAGCGGCACCGTAGGCAACAGCCTC 42090
Query 281797 ATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT 281856
||| || || | | | || | | || || ||||| | | | | || | |||
Sbjct 42089 ATCGGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTGAAGTAGTCGGTGATGAGCT-TCT 42031
Query 281857 T-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTAT 281915
|| || ||||| | ||||| || || | || || || || || | || || |
Sbjct 42030 GGACACGGGGGATACGGGTAGATCCACCGACGAGGACGATCTCGTGGACAAGGGACTTGT 41971
Query 281916 CCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTG 281975
| | || | || | || || ||||| | | | || || || | ||
Sbjct 41970 CGATCTTGGCGTCAGTGAGGACACGGTCGACGGGCTGGATAGTAGATCGGAAGAGATCCT 41911
Query 281976 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAA 282033
|| || || ||||| ||| | || || || | || || ||||| || |||||
Sbjct 41910 GGCAGAGCTCCTCGAAACGAGCACGGGT--GATGGAGGTGTAGAAGTCAATACCCTCGAA 41853
Query 282034 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 282093
| ||| || | || || | || |||| |||||||| || | || || ||||| ||
Sbjct 41852 AAGAGAGTCGATCTCGATGGAGGTCTGAGCGGAAGAAGAGAGAGTTCGCTTGGCACGCTC 41793
Query 282094 ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTC--AAATCTGTTTTATAT 282151
||| || || | || | ||| | || | |||| | | || || ||||||
Sbjct 41792 ACAAGCGGTTCGAAGGCGTCGGAGAGCACGAAC--ATTGGTGCCCAAGTCCTTTTTATGC 41735
Query 282152 TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCC 282211
|||| |||||| || | ||| | | || ||||| ||||| ||||||||||| |||
Sbjct 41734 TTTCGCTTGAACTCGTTAACGAAGTGGTTGACCAGACGGTTATCGAAATCTTCACCACCC 41675
Query 282212 AATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGA 282271
|| | ||| | || | |||| | || | ||| | || || |||| | | |||
Sbjct 41674 AAGTGAGTGTCACCGGCGGTAGACTTGACCTCGAAGATACCCTCCTCAATGGTGAGGAGA 41615
Query 282272 GTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG 282331
| ||||| || |||||||| | ||| || ||||| || || || ||
Sbjct 41614 GAGACATCGAAAGTACCACCACCAAGATCGAAGATAAGGACGTTGCGCTCGCCCTCAACC 41555
Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391
|| || || ||||| || |||| |||||||| || || || || || |||| | |||
Sbjct 41554 TTCTTGTCGAGACCGTAGGCAATGGCAGCAGCGGTAGGCTCGTTGATGATTCGGAGAACG 41495
Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451
|| || || ||||| || || || || || || || | || || ||||| || ||
Sbjct 41494 TTGAGGCCGGCAATGAGACCAGCGTCCTTGGTAGCCTGGCGCTGAGAGTCGTTGAAGTAG 41435
Query 282452 GCAGGAACAGTAATAACGGC 282471
|| || ||||| | ||||||
Sbjct 41434 GCGGGGACAGTGACAACGGC 41415
>seq96
Length=142780
Score = 96.9 bits (106), Expect = 3e-14
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347
||||| ||||| ||| | |||| || |||||||| |||||||||||| | |||||||||
Sbjct 55366 GGTAAGGAAGGCCGTCTCCGAGGTAACTTGATGGGTAAGCGTGTCGATTTCTCTGCACGT 55425
Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407
|| || |||||| |||| | || | ||||| | || || ||||| |||| || |||
Sbjct 55426 ACTGTCATTACTGGTGATGCCAACCTCTCTCTCCACGAGGTCGGTGTGCCTCGCAGCATT 55485
Query 432408 GCGAAAAATCTTACTT 432423
|| | | ||| ||||
Sbjct 55486 GCCAGGACTCTCACTT 55501
Score = 86.0 bits (94), Expect = 5e-11
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192
|| ||||||||||| | ||||||||||| |||||| ||||| |||| || | || |||
Sbjct 56809 GAGTTTTTCTTCCACGCCATGGCTGGTCGAGAAGGTCTTATTGATACTGCGGTCAAGACT 56868
Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGA 435239
||||| |||||||| ||||| || | | |||||| ||||| ||
Sbjct 56869 GCTGAAACTGGTTACATTCAGCGACGATTGGTCAAGGCTCTTGAGGA 56915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740583218961186
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |