Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq19 165 8e-36 seq126 127 2e-24 seq81 122 8e-23 seq82 107 2e-18 >seq19 Length=300009 Score = 165 bits (182), Expect = 8e-36 Identities = 1051/1664 (63%), Gaps = 55/1664 (3%) Strand=Plus/Minus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTT---CAATGAGTCGCTTT 148109 ||||| ||| |||||||| || |||||||| || ||||||| ||| |||||| Sbjct 120198 GACTGAGACTGATCAATGAAGGCACCACGGTCCGCAGCCATTTGCACAACCTGTCGCTGA 120139 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 || ||||| | ||||||||||| ||||| || | || ||| | |||| Sbjct 120138 GAA---ATTTCCCACACAGTCTTGTACAGAGCCTTGACATCGGCAGGGATGTTGGGGATG 120082 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||| || || ||| | |||| || | || ||| | || | | ||| Sbjct 120081 TTCTGGACAGAACCGTTATCAGCAATGATACGGTTCTTCATAGCATCGGACCAAAGGCCC 120022 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 | |||| || || | | || | | || || ||||| || ||||| || || || Sbjct 120021 AAGTCGACAAGATCCTTCAGAAGCCAGGGGTTGACAACCTGGAATTCGCCAGCAAGGACT 119962 Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349 || || | || | ||| || | || || || ||||||||||||| | ||||||| Sbjct 119961 CGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGC 119902 Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409 | || | || || ||||| || || || || ||| || | |||| | | ||| Sbjct 119901 GACGTGCTGGCAGTAGGCATAGGAGCAACGAGTAGACTGTTACGGATACCGTGCGTCTTT 119842 Query 148410 ATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCG 148469 | | | || | | |||||||||| || || || | || ||||||||||| Sbjct 119841 ACATCCTCCCGTAGGGACTCCCAGTCCCAAAGGTCAGAGGGCTTGACATTCCACATGTCA 119782 Query 148470 TACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCC 148529 |||| ||||| || |||||| ||||| | | | | ||| || || | | || Sbjct 119781 AACTGGAGAATACCCTCAGAAGCGGGAGAGCCCTTGAAGGTGGAGTAAGGGCCCTCCTCC 119722 Query 148530 GCCGCCAGTT-CGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCT 148588 || || | | ||| | || || ||| ||| || ||||| |||||| | Sbjct 119721 TTGGCGAGCTGCACAGAGGTGGTA-AGGGCAGCGTGGTAGATTGTCTCAAAGATTTGCTT 119663 Query 148589 GTTGAGCA---GCGCCGCCG-ACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGT 148644 ||| ||| | ||| | | | | ||| | ||||| || || | || || | Sbjct 119662 GTTCAGCTCACGAGCCTCAGGAGAC----TCGAAGGGCATGCGAAGTGCAAGGAAGGCAT 119607 Query 148645 CGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGC 148704 | ||||| || || ||||| | ||||||||| ||||| |||||| | ||| || | Sbjct 119606 CAGCAAGACCTTGAACGCCAAGGCCAATGGGTCGGTGACGCATGTTGCTGTTGCGAGC-C 119548 Query 148705 TCTCGAGC-GGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTT 148763 ||| | | || || ||||| ||| |||||||| | || ||||| || || || Sbjct 119547 TCTTGCACAGGGTAATGGTTTACGTCAATGATCTTATTCAGGTTGCGGACAACGACTCGA 119488 Query 148764 GTAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATGC-ATCGGTTCACGGC 148822 |||| | | ||| | || ||||| ||||| | | | | | ||| Sbjct 119487 GTAACATCGTGGAGCTTCTTGAAGTCGTAGCAAGCATCTTCATAGTTAATGAAAGAAGGC 119428 Query 148823 ---GATA--GAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATC 148877 || | || || |||||||| || || |||||| ||||| | |||||| | |||| Sbjct 119427 AGAGACAAGGACGCAAGATTGCAAACAGCGACCTCATCAGGGGCACAGTACTCAATGATC 119368 Query 148878 TCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTG 148937 || | |||||| ||| || | ||| || | ||||||||| |||||||||| |||| Sbjct 119367 TCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTG 119308 Query 148938 CACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGA-- 148995 || |||||||| |||||| | || || || || ||| | || | ||| Sbjct 119307 CAGTGATCCTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCG 119248 Query 148996 -ACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCT---CCTG---CTCG 149048 ||| | || | ||| || |||| | | | |||||||| ||| |||| Sbjct 119247 TACCAAAGC---TTCTGAGC-----CTTGATAGACTT-GCGACCCTTACCCTCTCTCTCG 119197 Query 149049 TA--TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACT 149106 || | ||| | |||| || ||| | || ||||| || ||| ||||||| ||||||| Sbjct 119196 TACTTCTCGTACAGAGCC--TCAAACTCGTCACCGTAACAGTCGGCGAGACCAGGGCACT 119139 Query 149107 TGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGG 149166 || |||||||| || | ||| |||||| | | || ||||||||||| ||||| | Sbjct 119138 CGTTGGGGCACATAAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATAAAAAGATCAG 119079 Query 149167 GCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGC 149226 | | |||||| || | ||||| || || | || || || ||| | Sbjct 119078 GGATCCAGAGAGCCAGGAACAGGTCACGAGCTCGGACCTCCTCCTTACCGTGGTTCTTTC 119019 Query 149227 GCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGC 149286 | || | || | || | ||| |||||||| ||||||| ||| | |||| || | Sbjct 119018 GGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCAAGGTAGATAGCGAATGCAC 118959 Query 149287 CCTTGCGCTTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCA 149343 | |||||| || ||||||||||| | || | ||||||| || || || | || Sbjct 118958 CAGGTCGCTTGTTGCCACCCTGGTCGACATAACGAGCAGTGTTGTTGAATACACGCAGCA 118899 Query 149344 TAGGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCA 149403 | || | | ||| ||| ||| ||||| ||| | |||| | ||| || || | Sbjct 118898 TGGGAACCACGCCGTTGGAAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGA 118839 Query 149404 CTTTGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGC-AGTCGCC 149461 | ||| ||||| | ||| || || || ||| | ||| || || || | |||| Sbjct 118838 TTCGGTGAACGTTTAAGCCAATACCACCAGCCAT-CTTGGAAATCATGGCACAAGTC-TT 118781 Query 149462 GAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCA 149521 ||| || |||||| || || |||||||| |||||| | || ||||| ||| | Sbjct 118780 GAGGGTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATATCGACAAGGAAGCATGAGGA 118721 Query 149522 CATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGT-AAAATATT 149580 || || || | | || ||||| ||| | |||||| || || || || | || Sbjct 118720 CAGCTGAGGCTGAGGGGTACCGGCGTTGAAAAGTGTGGGGGAAGCATGAGTGAAGAACTT 118661 Query 149581 TCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTA 149640 |||| ||| | | ||| | ||| | || || || || ||||| || |||||| | Sbjct 118660 GCTGG-ACATGAGGTTGTATGTCTCCAAGACACGCTCGATATCATCACCCCAGATGCCAA 118602 Query 149641 TGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTG 149684 || || ||||| | ||| ||||| || ||||| || | |||| Sbjct 118601 CAGCAACACGCATAATCATGTGCTGAGGACGCTCAGCAATTTTG 118558 >seq126 Length=117423 Score = 127 bits (140), Expect = 2e-24 Identities = 149/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| |||| || ||| | | | |||||||||||||| || Sbjct 31049 GTAGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTACC 30991 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || ||||||||||| || || ||||| |||||||| |||||| ||| Sbjct 30990 AGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTT 30931 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| ||||||| | |||||| || | ||||| || || || || || || Sbjct 30930 GACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGT 30871 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||||||||||||| Sbjct 30870 CTTGACGAAAATCTGCATG 30852 >seq81 Length=153540 Score = 122 bits (134), Expect = 8e-23 Identities = 148/200 (74%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || |||||||| || || ||||| || | || |||| ||||||||||||||||| Sbjct 143846 GTCGACTCTTTTTGGATGTTGTAGTCAGAGAGGGT--ACGACCGTCCTCGAGCTGCTTGC 143789 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| |||| | ||||||||||| ||||| |||||||||||||| |||||| || Sbjct 143788 CGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGACT 143729 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | || || | | ||| || || | ||||| ||| |||||||| || | Sbjct 143728 TGACATTGTCGATAGTATCAGATGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGG 143669 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || ||||| || |||||| Sbjct 143668 TCTTGACGAAGATTTGCATG 143649 Score = 89.7 bits (98), Expect = 5e-13 Identities = 134/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || |||||||| || || ||||| ||| | ||| | | | ||||| |||||||| || Sbjct 144128 GTCGACTCTTTTTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCCTCAAGCTGCTTACC 144070 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| ||||| || ||||||||||| |||||| ||| Sbjct 144069 AGCGAAGATAAGTCGCTGCTGGTCAGGAGGAATACCTTCCTTGTCCTGGATCTTAGACTT 144010 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || || | | ||| || || | ||| | ||| ||||| || || || Sbjct 144009 GACGTTGTCGATAGTATCAGATGACTCGACCTCAAGGGTAATGGTCTTGCCAGTAAGGGT 143950 Query 133643 TTTTACGA 133650 || |||| Sbjct 143949 CTTGACGA 143942 >seq82 Length=153091 Score = 107 bits (118), Expect = 2e-18 Identities = 146/200 (73%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | || | | | ||||||||||||||||| Sbjct 10438 GTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCA-TCCTCGAGCTGCTTGCC 10380 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||| ||||| || || ||||| |||||||| |||||| ||| Sbjct 10379 AGCGAAGATCAATCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTT 10320 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | || ||| || |||| ||||| ||| ||||| ||||| || Sbjct 10319 GACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGT 10260 Query 133643 TTTTACGAAAATCTGCATGG 133662 || |||||| ||| |||| Sbjct 10259 CTTCACGAAA--CTGGATGG 10242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483414992907640