Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq19 107 2e-18 seq126 93.3 4e-14 >seq19 Length=300009 Score = 107 bits (118), Expect = 2e-18 Identities = 231/343 (67%), Gaps = 7/343 (2%) Strand=Plus/Minus Query 147676 CCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGG 147735 ||||| | |||||| |||||||| |||||||||||| ||||| || ||||| || Sbjct 119208 CCCTCTCTCTCGTACTTCTCGTACAGAGCCTCAAACTCGTCACCGTAACAGTCGGCGAGA 119149 Query 147736 CCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATA 147795 || || |||| | || ||||| || | ||| | ||| | | || || |||| Sbjct 119148 CCAGGGCACTCGTTGGGGCACATAAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATA 119089 Query 147796 AACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGCAATCCTCGGCGCCC 147855 || ||||| || | ||| || || | || || || ||| | ||||| || Sbjct 119088 AAAAGATCAGGGATCCAGAGAGCCAGGAACAGGTCACGAGCTCGGACCTCCTCCTTACCG 119029 Query 147856 ATGTTGCGTTTC--AAATTAAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGA 147913 ||| |||| | || ||| | | ||| ||||||||||||||| |||| ||||| Sbjct 119028 TGGTTC--TTTCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCAAGGTAGA 118971 Query 147914 CGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTCGACATGGCGCACCATGTTGTTAA 147970 || | ||||| ||||| || ||||||||||||| || | ||||||| | Sbjct 118970 TAGCGAATGCACCAGGTCGCTTGTTGCCACCCTGGTCGACATAACGAGCAGTGTTGTTGA 118911 Query 147971 ACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGT 148013 | || |||| |||||| ||| |||| | | ||| |||||||| Sbjct 118910 ATACACGCAGCATGGGAACCACGCCGTTGGAAGTACCGTTGGT 118868 >seq126 Length=117423 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||||||| ||| || ||| |||||||| ||||| | | Sbjct 31046 GACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCA 30987 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || ||||| || || || || ||||| || || || || || || | Sbjct 30986 AAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACG 30927 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || |||| | |||||| || | || | ||| || || || || || || Sbjct 30926 TTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTG 30867 Query 132110 ATGAAAATCTGCATGA 132125 | |||||||||||||| Sbjct 30866 ACGAAAATCTGCATGA 30851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476605474707960