Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq17 179 5e-39 >seq17 Length=315547 Score = 179 bits (198), Expect = 5e-39 Identities = 358/515 (70%), Gaps = 28/515 (5%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||| ||||||||||| ||||| ||||||||| | || | Sbjct 169757 GATCTGGCAAATGTAC-AAGAAGGCAGAGGCCTCCTTCTGGACAGCCGAGGAGATTGATC 169699 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGCTGAGCGAC-GACGAGCGCCATTTC 1455887 | | || |||| ||||| || | | || || |||| ||| Sbjct 169698 TTTCCAAGGATCTCCACG----ACTGGAACAACCGTTTGACTACAGATGAGCAGTTCTTC 169643 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| ||| | || || ||| ||||| ||| |||||| ||||| ||||||||| | Sbjct 169642 ATCTCCCACATTCTTGC-TTTCTTCGCTGCCTCCGATGGTATCGTCAACGAGAACCTTGT 169584 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 | || || | |||||||| | || ||||| || | || ||||| |||||||| Sbjct 169583 TGAGCGATTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTACGGTTTCCAGAT 169524 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || |||||||||||||| || ||||| || || || || |||||| ||||||| Sbjct 169523 CATGATGGAGAACATCCACTCTGAGACATACTCCCTGCTCATTGATACCTACATCAAGGA 169464 Query 1456068 CCCGGTCGAGAAGGAC-CACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAA 1456126 || | | | ||| || ||||||| |||| | ||||| | || | | | || | Sbjct 169463 GCCTGCCCA-AAGAACATACCTCTTCAACGCCGTTGACACTATTCCTTGCATCCGAAAGA 169405 Query 1456127 AGGCCGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAGCG 1456183 |||| |||||||| || |||||| ||||||| ||| || ||||| | || Sbjct 169404 AGGCTGACTGGGCCATTCGATGGATCCAGGACAAGGA----CTCCTCA-TTTGCTCAACG 169350 Query 1456184 GCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTC-TCGG-GCAGTTTCTGCGCCATC 1456240 || || | |||||| || || ||||| ||||| ||| ||| || || | | ||||| Sbjct 169349 TCTTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGC--CTCCATC 169292 Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 || |||||||||||||| ||||||||||| ||||| Sbjct 169291 TTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCT 169257 Score = 93.3 bits (102), Expect = 6e-13 Identities = 177/253 (70%), Gaps = 6/253 (2%) Strand=Plus/Minus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCG-GTGGC 1456581 |||||| ||| ||||| |||||| | ||||| | | |||| | || || |||| Sbjct 169147 ATCATCACCGATGCCGTTACCATCGAGCAGGAGTTCCTTACCGAGGCTCTCCCTTGTGGT 169088 Query 1456582 GCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGC 1456641 || | ||||||||| ||| | |||||| |||||||| || || || || || || Sbjct 169087 CTTC-TAGGCATGAACTCCAAC-CTCATGAAGCAGTACATCGAGTTC-GTGGCTGATCGT 169031 Query 1456642 CTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGAT 1456701 ||||||| || ||||| | |||||| ||| | | | ||||| ||| | || Sbjct 169030 CTGCTCGTTGCTCTCGG-TAATGAGAAGGTGTACAAGGCCACAAACCCCTTCGACTTCAT 168972 Query 1456702 GGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGC 1456760 |||| ||||| || | ||||||||||||||||||||| |||| || ||| ||| Sbjct 168971 GGAGAACATCTCTCTTGGTGGCAAGACCAACTTTTTCGAGAAGCGCGTTGCCGACTACCA 168912 Query 1456761 CAAGGCCGGCGTC 1456773 |||||||| ||| Sbjct 168911 AAAGGCCGGTGTC 168899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177718509783682