Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq81 123 3e-23 seq126 113 5e-20 seq82 98.7 1e-15 >seq81 Length=153540 Score = 123 bits (136), Expect = 3e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| ||||| || || || || ||||| ||||||||||| | ||| || Sbjct 143867 AGGCGAAGCACAAGGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCAGAGAGGGTACGA 143808 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| ||||| || |||||||| |||||||| || || || |||||||| Sbjct 143807 CCGTCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCC 143748 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| ||| | || || || || || || || || || Sbjct 143747 TTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCAGATGACTCGACCTCAAGGGTG 143688 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| | || || ||||| |||||||| Sbjct 143687 ATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 143650 Score = 82.4 bits (90), Expect = 8e-11 Identities = 143/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| ||||| || || || || ||||| |||||||||||| | |||| | Sbjct 144149 AGACGAAGCACAAGGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCGGAGAGGGTGCGG 144090 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| || || || || || | |||||||| || || || || ||||| Sbjct 144089 CCATCCTCAAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCAGGAGGAATACCTTCC 144030 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| ||| | || || || || || || || || ||| Sbjct 144029 TTGTCCTGGATCTTAGACTTGACGTTGTCGATAGTATCAGATGACTCGACCTCAAGGGTA 143970 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGA 134703 ||||| || || || | || || |||| Sbjct 143969 ATGGTCTTGCCAGTAAGGGTCTTGACGA 143942 >seq126 Length=117423 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || || || ||||| || ||||||||||||| Sbjct 31079 CCACCACGGAGGCGGAGGACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 31020 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || |||||||| || || ||||| || | |||||||| || || || Sbjct 31019 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGA 30960 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | |||||||| || ||||| Sbjct 30959 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 30900 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || || | || || |||||||| ||||| Sbjct 30899 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 30853 >seq82 Length=153091 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || || || ||||| || |||||||||||| Sbjct 10468 CCACCACGGAGACGGAGAACAAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAG 10409 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| ||||| || || ||||| ||||| || || || || Sbjct 10408 AGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGTTGGTCCGGGGGA 10349 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | ||||| || || || || Sbjct 10348 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACC 10289 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705 ||||| || ||||| || || || | || || |||||| Sbjct 10288 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAA 10250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505392328901720