Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq19 127 2e-24 seq126 86.0 5e-12 >seq19 Length=300009 Score = 127 bits (140), Expect = 2e-24 Identities = 312/468 (67%), Gaps = 9/468 (2%) Strand=Plus/Minus Query 131603 GGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAAC 131662 || || ||| |||| ||||| || | ||| ||||||||| || || ||||||||||| Sbjct 119145 GGGCACTCGTTGGGGCACATAAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATAAAA 119086 Query 131663 AAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATA 131722 | ||| || | ||| | || ||||| || | |||| ||| || |||| Sbjct 119085 AGATCAGGGATCCAGAGAGCCAGGAACAGGTCACGAGCTCGGACCTCCTCCTTACCGTGG 119026 Query 131723 AtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCC 131782 | ||| | || | || || || | ||| || |||||||| || | || | || Sbjct 119025 TTCTTTCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCAAGGTAGATAGCG 118966 Query 131783 ATTGCGCCTTTGCGC---TTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACG 131839 | ||| || ||| || || || || | |||| |||| | |||||||| |||| Sbjct 118965 AATGCACCAGGTCGCTTGTTGCCACCCTGGTCGACATAACGAGCAGTGTTGTTGAATACA 118906 Query 131840 CGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTG 131899 |||| |||||| ||| ||||||| | || ||||| | |||||| |||| || Sbjct 118905 CGCAGCATGGGAACCACGCCGTTGGAAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTG 118846 Query 131900 GCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCA 131958 || | |||| ||||||||| | |||||||| || ||| | || || || | || || Sbjct 118845 GCACGGATTCGGTGAACGTTTAAGCCAATACCACCAGCCAT-CTTGGAAATCATGGCACA 118787 Query 131959 TTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCA 132018 | | || |||| |||||||| || | ||||||| | || ||||| | ||||| Sbjct 118786 AGTCTTGAGGGTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATATCGACAAGGAAGCA 118727 Query 132019 AGAGGACAACTGTTGGTGAAATGTGCCGGC--TGAAAACAATGTGGGG 132064 ||||||| ||| | ||| || ||||| ||||| | ||||||| Sbjct 118726 TGAGGACAGCTGAGGCTGAGGGGTACCGGCGTTGAAA--AGTGTGGGG 118681 >seq126 Length=117423 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || || || ||||||||||||| | |||| | || |||||||| ||||| Sbjct 31049 GTAGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCA 30990 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || || ||||| || ||||| || | ||||| || || ||||||| || Sbjct 30989 GCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 30930 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | | || || || || || || | || ||||| || || Sbjct 30929 ACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTC 30870 Query 27231 TTCACAAAGATTTGCAT 27247 || || || || ||||| Sbjct 30869 TTGACGAAAATCTGCAT 30853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424929423088632